Report for 6001.m00157

 > 6001.m00157, length: 1003, copies: 1 

MWGQSATAAVDFAANPLHSVPAASVMTRPSRPVKKPLGDSLSCAPQNTRIIDLGGEMASALTGAMTSVIIKLSAL

LGEEYAKLKGLQREVEFMKDELSSMNALLHRLAEVDSDLDVQTEEWRNQVREMSYDIEDCIDGFTHRLGHIGIAE

AAGPVQRVAQQLKVLKVRRQIASQIQELKGRVEDASKRRMRYKLDDRIFEPSIARAIDPRLPSLYAESDGLVGIE

TPRAVLVKLIMEGDDASFQQLKVISIVGPGGLGKTTLANEVYRRLEGQFQCRAFVSLSQQPDVKRILRNIFCQVS

QQVYDSTSVWDEENLIDAIRGFLKDKRSAIVISYGRYFIVIDDIWSIQAWKTIKCALLMNNLGSRIITTTRSVTI

AKSCCSPQHDHVYEIMPLSTANAMSLFLKRIFGTEDICPPQLEEISCKILKKCSGSPLAIITIASLLTNKASTKE

EWERVHNSIGSTLEKDPSVEEMQRILSLSYDDLPHHLKTCLLYLCIFPEDCEIERDQLVKRWIAEGFINTGSGQD

LEKIGESYLNDLISRSMIQPVKVRYDGQVDSCRIHDMILDLLMSKSIKENFATFLGEQNQKLVLQGKVRRLSLSY

YSQENVMVPSTAIISSCRSLSIFGYAEEMPSLSEFRVLRVLDIEHGEDMDSNYLEHVRRLSQLKYLRLNVRSIDA

LPEQLGELQHLQTLDLVSTKLRKSPKSIVRLQNLTCLRINNLELPEGIGCMRALQEVSEIKISRNSSASSLQELG

NLTKLKILGLCWCISDIHGGTKTLVNNLVSSLRKLGRLNLRSLCIQSSFKYSIDFLLDSWLPTPHLLQKFQMGMC

YYFPRIPVWIASLENLTYLDINLNPVKEEVLEILGNLPALLFLWLTSKSADPKQRLIINSNMFMCLKELYFTCWS

IESGLMFQEGCMAKLEKLHLPFHAATALEFGIHHLSSLRLLVVEIICSGATIRQVESLEETIRKTADLLPYRPTV

EIRTWDEENMVEEQKEKDMGEEGTQTSC

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	206	523	2.2e-59
NB-ARC [Pfam ls]	206	523	1.5e-59

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	662	684	3
LRR [sensitive, ls]	662	684	67
LRR [sensitive, ls]	685	710	0.3
LRR [sensitive, ls]	685	710	6.7
LRR [sensitive, ls]	840	863	0.6
LRR [sensitive, ls]	840	863	13

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	51	868	5e-42
Mla1 [Hordeum vulgare].	61	978	1e-150
RPM1 [A. thaliana]	71	941	1e-67
Pi-ta [Oryza sativa]	84	758	5e-94
Pib [Oryza sativa].	108	402	9e-14
Pib [Oryza sativa].	216	709	4e-69
M [L. usitatissimum]	217	844	2e-11
Xa1 [Oryza sativa]	246	755	2e-35
RPS2 [A. thaliana]	248	817	2e-23

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	78	102

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 6001.m00157

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)