Report for 6070.m00188

 > 6070.m00188, length: 946, copies: 1 

MAGAFVSASVGVLNPLLTKLSALVEGEYKLLKSVKKDIIFLRNELSSISVLLEHLSTKEDKLDGPTKEWRNNMLE

LAYDIEDCIDLFIHKLSCGDANANFVQKIGSKIKKLWGKHQITECIQELKNRVMEEDQRRKRNQIDDFISEPSVV

EIDPRLPALYEEVERLVGIDGPREKIIKWIMTKGKPLEQRKVVSIVGLGGLGKTTLANEVYKTIQGDFKCITFVS

ISRTPNIRKILVDMLKGLGSNGDVSEDEQNLISHLRGFLKDKRYLIVFDDIWDIGAWKVVNCAFPENNLGSIIIT

TTRNTAVAEACSRTTSEGYLHSMQPLEEQDSQRLFYRRAFNSESCCPPHLEDISHAIISKCRSLPLAIISIASLL

SIKPDTEDQWMQVHNSIGVTLNSDVEVRKILMLSYYDLPYPLKNCLLYLSMYPEDYVIDRQELIWRWIAEGFIIE

AKGKTREQVGENYFNELINRSLIQPVYIQYDGRASCCRVHDIVLDLIISLSTGQNFVTIVHEQQHWSSFKKIRRT

WFPSNGTDNRIVKEITNNCSHVRSLFFDSPKPEQIPQFKKCHALRVLVLDGCMSLESQHINSLTYLFQLKYLKLN

VANVTEMPKDIGRLQQLETLIIRGGGHVNEINIPSSVCRLQKLERLIVDYPMRLPDEIGFLQALEMLSLFYNIEY

SIKCLQELRRLTRLRYLRIRTPFGGDVARFERYKDAFYMTLDELGKNSLQSLHVHVTTKFSDTLMDSCCSSAPGL

RELSTSGVGISKLSEQMISLSNLAYLVIFYNTRSNDQKDINLLGCIPKLLYLKVIFAQGWEDGLTVGCGGFPCLK

ELMFRHSRLHWLLFEPGAMPKLQRLSIELFAQKAASKLGDVKALEDAIRNVASIQTRCLTLEILRRYEDEMVKED

EEEQLKGSTEGGGTEEHHIQQPLIIVGNQKRWKPVLFGNSDKVQAS

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	151	453	1.9e-72
NB-ARC [Pfam ls]	151	453	5.2e-73

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	1	667	7e-41
RPM1 [A. thaliana]	1	852	2e-71
Pi-ta [Oryza sativa]	1	620	1e-71
Mla1 [Hordeum vulgare].	11	854	1e-118
Pib [Oryza sativa].	162	644	4e-56
RPS2 [A. thaliana]	163	754	4e-27
Xa1 [Oryza sativa]	192	729	1e-26

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 6070.m00188

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)