Report for 6089.m00024

 > 6089.m00024, length: 238, copies: 1 

MASAGSGGCGISAYATTRSPARYLTCSAIAPPSTSRTSTTTTSIVGGVPRWLDALPNLMVLRLSHNSISGHIPPS

LANLTKIVQLEFDQNLLESSIPDGLPRLPALRMLALSQNSLTGEILPSFFNMTSLRGLALANNVFRRRRTLPRRA

SARARETMRGAPAPGRGSSAGAGRPSCQSRTPTDDGGAWEFLDNLTNCNALAEIFLDGNMFAGVMLSSIVVPSAI

GRLATSRSYSSST

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	57	80	0.0032
LRR [Pfam ls]	105	128	3.5

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	57	80	0.00014
LRR [sensitive, ls]	57	80	0.0032
LRR [sensitive, ls]	81	104	0.34
LRR [sensitive, ls]	81	104	7.7
LRR [sensitive, ls]	105	128	0.16
LRR [sensitive, ls]	105	128	3.5

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Xa21 [O. sativa]	43	219	2e-12
Xa21 [O. sativa]	46	138	4e-11

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 6089.m00024

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)