Report for 6108.m00182

 > 6108.m00182, length: 970, copies: 1 

MEEAAAAVHRRWRRRLLPKLMLLLCAVVHGQQPDSLGFISIDCGIPDGGGYSDESTRGLRYVPDAGFLDAGAGLS

AGINPPYTDRDLAARYLTVRYFPGAASAAGERGGCYTLRQLSPGGRYLVRATFYYGNYDGAIAMLPVVFDLHLGA

NRWTAVNVTAADAIYIFEAVVSPPADFLQVCLVNIGKGTPFISGLDLRPLKPELYPEATANQSLLLLNHDRPPAR

FAFNRYQFWRPASYYKLFRYPFDPYDRLWQPYGDDPSWTNITVAAAVDVTNISRSDDPSPILRSAATPANATVRR

LDFPWSSDDAATTTYLLLLYFAELQRLPAGAARRFDVLVDGDASAGGGRRGYTPRYLAAEVVRSTVRAARPGQRH

VVSLVAAPDSALPPIVNGLEIYSVQPMPELATNDRDAKAMMEIRDNYELKKNWMGDPCAPKAFAWVGLNCGYSSS

DPALVTALNLSSSVLIGPVNLSFGDLKSLQYLDLSNNSLSGPIPDFLVQMPALKFLDLSSNKLSGSIPSDLLQKR

ENGSLVLRIGNNANLCYNGANNTCAPESKQSKRILVIAIAVPIVAATLLFVAAKFILHRRRNKQDTWITNNARLI

SPHERSNVFENRQFTYRELKLMTSNFKEEIGKGGFGTVFLGYLEDGTPVAVKMCSKTSSEGDKKFLAEAQHLTRV

HHRNLVSLIGYCKDKKHLALVYEYMQGGNLEDRLRGEASIAAPLTWHQRLKIALDSAQGLEYLHKSCQPPLIHRD

VKTRNILLSGDLDAKIADFGLTKVFAGDVVTHVTTQPAGTLGYLDPEYYHTSRLSEKSDVYSFGVVLLELVTGRP

PAVPLGDGDGGGGESVHLAVWARQRLAEGDIESVADAAMGGCFEVNSAWKVAELALRCKERPSRERPAMADVVAE

LKECLELEASRALGRGYSCYSSGSGGGSSVATTTTTSGAANISAAASAASVSDAQIGELRQESVLELGPR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam fs]	478	501	4.3e-05
LRR [Pfam ls]	478	501	0.00073
LRR [Pfam ls]	502	526	0.017
Ser/Thr pkinase [Pfam fs]	624	826	1e-53
Ser/Thr pkinase [Pfam ls]	624	898	5.3e-48

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	454	477	2.2
LRR [sensitive, ls]	454	477	49
LRR [sensitive, ls]	478	501	3.2e-05
LRR [sensitive, ls]	478	501	0.00073
LRR [sensitive, ls]	502	526	0.00076
LRR [sensitive, ls]	502	526	0.017

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	454	901	5e-53
Xa21 [O. sativa]	454	725	1e-22
Pto [L. esculentum]	604	910	1e-55
Rpg1 [Hordeum vulgare]	607	824	4e-36
Rpg1 [Hordeum vulgare]	613	910	6e-27

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	560	582	out -> in

Report for 6108.m00182

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)