Report for 6115.m00155

 > 6115.m00155, length: 940, copies: 1 

MATILDSLIGSCAKKLQEIITEEAILILGVKEDLRELQEKMEQIRCFISDVERRGMEDSSIHNWISRLKDAMYDA

DDIIDLVSFEGSKLLNGHSCSPRKTIACNGLSLLSCFSNIRVHHEIGNKIRSLNRKLEEIAKDKIFVTLENTQSS

HKDSTSELRKSSQIAESNLVGKEILHASRKLVSQVLTHKEKKTYKLAIIGTGGIGKTTLAQKVFNDEKLKQSFDK

HAWICVSQDYSPASVLGQLLRTIDAQCKQEESVGELQSKLESAIKDKSYFLVLDDVWQSDVWTNLLRTPLYAATS

GIVLITTRQDTVAREIGVEEPHHIDQMSPAVGWELLWKSINIEDEKEVQNLRDIGIEIVQKCGGLPLAIKVIARV

LASKDKAENEWKKILANYVWSMYKLPKEIRGALYLSYDDLPQHLKQCFLYCIVYPEDWTIHRDYLIRLWVAEGFV

EVHKDQLLEDTAEEYYYELISRNLLQPVDTSFDQSKCKMHDLLRQLACHLSREECYIGDPTSLVDNNMCKLRRIL

AITEKDMVVIPSMGKEEIKLRTFRTQPNPLGIEKTFFMRFTYLRVLDLTDLLVEEIPDCVGYLIHLRLLDLSGTN

ISCLPKSIGALKNLQMLQATNLKYLRIDGASAITKIGPEFVGCWEGNLISTETVAFPRLELLAIKDMPNWEEWSF

VKEEELQEEKAAAAAQEGGKDGTAASKQKGEEAPSPTPRSSWLLPCLKQLQLVECPKLRALPPQLGQQATNLKEL

DIRRARCLKMVEHLPFLSGILFVQSCQGLEIISNLPQVRELLVNHCPNLRHVEMLGGLEQLWLSKNMQKISSLWV

PGLEEQHRQLHGDEHKLERCRRAHEKKVEVKVDPIGRTAAGRRSKGDGIRNRPRIVAAAVVLASATGVVAAAGVI

AAAVGVIIAVTGVVSAPLQGPWLQWISRTPSAAWSQESQR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	153	455	2.4e-64
NB-ARC [Pfam fs]	196	455	3e-66
LRR [Pfam ls]	590	612	0.011

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	567	589	2.9
LRR [sensitive, ls]	567	589	32
LRR [sensitive, ls]	590	612	0.00096
LRR [sensitive, ls]	590	612	0.011
LRR [sensitive, ls]	621	645	0.84
LRR [sensitive, ls]	621	645	9.2
LRR [sensitive, ls]	721	745	1.6
LRR [sensitive, ls]	721	745	17
LRR [sensitive, ls]	746	768	4.6
LRR [sensitive, ls]	746	768	50
LRR [sensitive, ls]	787	809	2.2
LRR [sensitive, ls]	787	809	25

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	4	621	5e-59
RPS2 [A. thaliana]	5	811	2e-42
RPM1 [A. thaliana]	15	628	4e-56
I2 [L. esculentum]	34	617	5e-62
Pi-ta [Oryza sativa]	58	619	3e-39
Xa1 [Oryza sativa]	120	504	1e-40
Pib [Oryza sativa].	166	619	2e-41

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	880	902	out -> in
putative TM domain	904	926	in -> out

Report for 6115.m00155

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)