Report for 6116.m00135

 > 6116.m00135, length: 905, copies: 2 

MAEAVILLTVKKIGVALGNEAINQATSYFKKSVTQLTELQGSMGRIRRELRLMHEFFSGMDVRNRNNRKYEIWVE

EVRMLVYQIEDIVDNYLHLVGHKHHIGWGTYLKKGFRRPNVLLSLNKIASLVKDVEASLVHLFQAKERWVFMDVG

AATGGESSSYIVVEKSRHLASISRSLDEEDLVGWCMGWEVWVKQLWQQMYRSEKEKFECHAWVSISQTYSIKAVL

KCLINELDEKKSIRGNISDMDTGGLQDELKKFLKDQKYLIVLDDVWVPEAVNDLFGALVSNLSRSRVLVTTRIDG

VAHLAFPDKRITLKPLSEQESWELFCRTAFPRDKDNECPAELMTLAKQIVSKCQGIPLAIVSVGRVLFVCEKTEE

EFKRIHNQLDWELVNNPSLEHVRNILYLSYIYLPTHLKSCFLYCSLFPEDYLFTRKRLVRWWIAEGFVEKRGIST

MEEVAEGYIKELVYRNMLQLVQKNSFGRMKSFRMHDILHELAVDLCRRECFGHSYNSKNKHEEFLEKDERRMVIH

KLDKDVNQAISSEWSRLRSFVTLERNMSSPNLLTLVAGKCRYMSVLELIGLPKDNIPNVIGDLFNLKHLSLRDSM

VKFLPNSIEKLSNLMTLDLCKSEIQELPGGIVKLKKLRHLFAEKLNGKFWRDFQWSTGVRIHRGLEMLSELQTLQ

ALEVQDERSVRSLRELRQMRSIRILGVKGRYFEDLCESLCQMEYLSLLNIAASDEEEVLQLNGLKWLHPNVKKLR

LIGRLAQTGLLSCAPEAGSHSLCSLCLFWSQLAEDPLPSLSRWSNLTDFRLTRAYLVEHVVFLPGWFPRLKTLYL

VDMPNLKRLKIHQGSITSLEELHLINLRGMTEVPSDIIFLLPTLKYLYFLEITWDFFMALRRSRIGSIRWRYSLA

SDARL

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	164	448	1.7e-53
NB-ARC [Pfam fs]	207	448	3.2e-65
LRR [Pfam ls]	590	612	2.3

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	590	612	0.21
LRR [sensitive, ls]	590	612	2.3
LRR [sensitive, ls]	613	635	0.74
LRR [sensitive, ls]	613	635	8.1
LRR [sensitive, ls]	830	853	1.2
LRR [sensitive, ls]	830	853	13

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
RPM1 [A. thaliana]	22	878	2e-96
Mla1 [Hordeum vulgare].	63	744	2e-47
Pi-ta [Oryza sativa]	73	618	1e-32
Pib [Oryza sativa].	163	652	1e-45
I2 [L. esculentum]	195	845	2e-42
Xa1 [Oryza sativa]	204	729	6e-35
RPS2 [A. thaliana]	253	859	1e-25

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 6116.m00135

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)