Report for 6119.m00188

 > 6119.m00188, length: 1260, copies: 1 

MEAAAVSASTGALNTLLPKLADLLLLVAGEHHSSRRAVEDGVEHLESELTSMRAALEKVSAAAAPPDQLDGQVRL

WARDVRDISARRRSRAIAAEIERIKKEVEEVSRRRERYRIDDHVVAVVDDAPVDRRLPALYANFASLVGVDASVE

EVIKLLSMEGYQGAVMMRRKLKLIAIVGPGGIGKTTLANLVYQKLHGQFECQAFVSVSQKPNVKAVLSSILCQVS

QLKYENFSSWGEKEIIDKIRDVLKDIRYFIIIDDIWDKPTWQLLKCVLIDNDHGSKIITTTRNMDVAKLCCYSDD

VDGTIQIQQPLSVADSEKLLYHKVFHNERCPPQLKGISQKILKRCGGLPLAIITIASLFANRQTQTEDHWNSDYI

IDRDDLIWRWIAEGFIQPKQGTILYEKGERYFDELINRNLIQPICIDVHGKAQACRVHDTILEFIAGLSIEENFV

AILNGQCSTSDLPKRIYRLSLQNSKDDITIPDATERFSHVRSLWQGIDLKMPLSGFRVLRALDLGDCSSQNIDNI

GNLVHLRYLRLRGTHYNKLPKEIGNLRFLQTLDIKQTRIKELPSTVVHLTQLMRLMVDTWTKLPNGIGNMECLEQ

LSEIDTSMYPSLMKELSDLPNLRVLEILISTWEQTKEEQFLDCLGSMKKLQIVHIFAPDISVDFMLNKDWTLHEL

QKLTVGVRRESEDIFKLNPLSGWAEFSPFSILPRWINSSLTNLSYLSIIVKILQQKDLGVLGDLPALCSLYLSVT

GALKERLMIIGHSRGNGQAIAFQCLANFNFTSPAMMLVFRHGAMQRLQMLSFCFQLKETKVFHSDLDMGLENLTS

LKTVHFQIDCRYARLWEVQAAEVALRSATNLNLNSPTLDLSKHFERLMYWDGMEEIPEMKIFKEENVGIVKIGPW

GGNRGRRYDIEVAPHHLESIRVHSDLAVHSFEFEYSDRNGQKHVAGPWGGYGGSNVHMVVLAKIGPCGGKGGEAC

DIMVPPHHLESVTICSNIVIHSLTFSYNDHNGDHHLAGLWGSHGGSNQTIQFGPSEFITRVYGTIGSYNTPSDVV

TSITLVTNAGCYGPFGQENGIPFDFPVQGNGSIVGFFGHANLYVDAIGVYVTPSMGTRKEEENVGLTKIGPFGRR

GGNPFDIKVTPHQLESITISSNIVINSLAFSYISHDKQQHIVGPWGSGGESNYTIQLGPSEFFVKVSGTFGPFGE

FPNVITSLTFVTNTHHQYGPFGQGGGTPFHAPMSGNGSIVGFFGREGLCIEAVGFYFCAL

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	127	421	8.8e-21
NB-ARC [Pfam fs]	141	370	7.1e-35

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	10	863	1e-107
Pi-ta [Oryza sativa]	88	658	9e-59
RPM1 [A. thaliana]	91	830	7e-42
RPS2 [A. thaliana]	92	563	9e-24
I2 [L. esculentum]	124	675	8e-26
Pib [Oryza sativa].	140	577	2e-35
M [L. usitatissimum]	142	368	1e-10
Xa1 [Oryza sativa]	158	723	1e-19

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value
Jacalin-like lectin domain	972	1103	1.3e-22
Jacalin-like lectin domain	1127	1259	1.5e-26

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	38	59
putative coiled-coil	94	115

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 6119.m00188

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)