Report for 6119.m00192

 > 6119.m00192, length: 1309, copies: 1 

MEAVVSVSTGALNTLLPKLADLLLLVAGEQHSSRRAVKDGVEHLESELTSMRAALDKVSAAPPDQLDGQVRLWAR

DIRDMSYDIEDAIDTYLLREAAAAPRRPCCIGFAHGHGRSRRRAAIVVEIERIKKEVEEVSRRRERYRIDDHVVV

VVDDAPVDLRLPALYTNAASLVGVDASVEEVIKLLSMEGDQGAVMVRRKLKLVAIVGPGGIGKTTLANLVYQKLH

GQFECQAFVSVSRKPNIKVVLSSILCQVSQLKYENFSSWGEKEIIDKIRDILKDIRYFIIIDDIWDKPTWQLLKC

VLIDNDHGSKIITTTRNMDVAKLCCYSDDVDGTIQIQQPLSVADSEKLLYHKVFHNERCPPQLQGISQKILKRCG

GLPLAIITIASLFANRQTQTEDHWNSDYIIDRDDLIWRWIAEDFIQPRQGTSLYEKGESYFDELINRNLIQPICI

DVHAEAQACRVHDTILEFIAGLSIEENFVAILNGQCSVSDLPKRIYRLSLQNSKDDITIPDATERFSHVRSLWQG

IDLKMPLSGFRVLRVLDLGDCSSQNIDNIDNLVHLRYLRLRGTHYNKLPKEIGNLRFLQTLDIKQTRIKELPSSV

VHLTQLMRLMVDTWTKLPNGIGNMECLEHLSEIDTSMYPSLMKELSDLPKLRVLELLLSTWEKSKEKPFLDCFSC

MKKLESLHIFAPHISLDFMLNVDWTLQELKKFTVCICPKSEDIFNLSPLSILRQEDLGVLGDLPALCSLHLQVID

VADEMLVILSHSGGNGHARSAFQCLSNFNFTSPAMVLAFRHGAMQRLQILSFRFQLKKTKVFHCDFDLGLENLTS

LKTVHFGVDCRYARLWEVQTAEAALRNATSLNLNCPTLDLSKHFERLMYWDGMEEIPDLKIFKEENAGLAKIGPW

GGNRGRLYDIQVAPHHLESIKVCSDMAAIHSFEFTYSDHNGKKHTAGPWGGYGGNNVHMIQLAPSEFLVEVSGTF

GRFRAALDIITSLTFVTNAQSYGPYGQREGTPFHISVQSRGCIVGFFGRAGWYVDAIGIYVKPKLQKVKDKAKFG

HAKIGPCGGNGGKAHDIMIQFGPSELLTTVSGTFGSYNTSYDVITSITLVTNIGCYGPFGKEKGISFNFPIQGNG

SIVGFFGHAELYIDAIGVYVNPWVGIWKQEEKEGIIKIGSFGRGGGCRCDIKVTPQHLESITISSKIVINSLTFS

YRSHDGLQYILGPWGGGGENNYKINLGPSEFITKVHGTFGPFGEFPIVITSLTFINNAGHQYGPFGQGGGTPFHA

PISGISLDFMLNVDWALQELTEKAKIYLTSARRS

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	156	450	2.7e-24
NB-ARC [Pfam fs]	170	399	2e-36

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	5	863	1e-110
I2 [L. esculentum]	9	653	1e-23
RPM1 [A. thaliana]	12	610	2e-41
RPS2 [A. thaliana]	29	601	2e-24
Pi-ta [Oryza sativa]	61	660	1e-62
Xa1 [Oryza sativa]	162	684	8e-19
Pib [Oryza sativa].	169	606	8e-36
M [L. usitatissimum]	171	397	4e-11

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value
Jacalin-like lectin domain	905	1038	1.4e-26

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	124	144

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 6119.m00192

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)