Report for 6123.m00029

 > 6123.m00029, length: 672, copies: 1 

TLRNCNISDKLTSVDFSNFKNLTDLNLVWNNFMIDSSNSSILPSGLECLQQDTPCFLGQPEYSSFAVDCGGSRSV

KSDDKFIYESDGANLQGASYYVTRPVRWGVSNTGKFYMGEPNRSYIIYTSNQFNKTLDSELFQTARTSPSSLRYY

GIGLKNEIFPDGQIWQSMGRRIFDIYIQGERKEQDFDIKKYANEKSNTPVERQYFTDVTNNFMEIHLFWAGKGTC

CIPTLGFYGPSISALSVSFSGDPGLNINNTTNGENTSSGRRGLVVGVVVSAVIVGLLAVTGTFVWTQKRKRLEVE

MEELLSIVGTPNVFSYGEIKSATDNFSTQNILGRGGYGLVYKGKLLDGRMVAVKQLSATSHQGKREFMTEIATIS

AVQHRNLVKLHGCCIESDAPLLVYEYMENGSLDRAILGKASLKLDWRTRFEICVGIARGLAYLHEESSTRIVHRD

IKTSNVLLDANLNPKISDFGLARHYNDSMTHVSTGVAGTLGYLAPEYAMMGHLTEKADVFAFGIVAMEIIAGRPN

FDDSVEDDKKYLLGWAWCLHENKQPLEILDPKLTEFNQEEVMRVINVILLCTMGLPHQRPPMSKVVSILTEDIET

VEVEANARPSYIPQSQIRSENDGFIAGYFSGSSIQQSSGTQGSMPSSSSSKPKFHRDTSPLALSPCSSCEID

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	326	527	2.9e-55
Ser/Thr pkinase [Pfam ls]	326	591	5.9e-48

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Xa21 [O. sativa]	246	408	2e-12
FLS2 [A.thaliana]	255	594	7e-42
Pto [L. esculentum]	314	591	2e-52
Rpg1 [Hordeum vulgare]	314	595	7e-36
Rpg1 [Hordeum vulgare]	314	602	1e-31

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	268	290	in -> out

Report for 6123.m00029

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)