Report for 6165.m00036

 > 6165.m00036, length: 843, copies: 1 

MEAAIGAASWLVDKVVTQLSDELVAAYIASTELGLNMEQIKRDLMFMQGLLHHARERRDKSNPGLQGLLEELRKK

ADEAEDVLDELQYFIIQDQIDGTHEATPVVDDGIRGQVLHGRHALRHTIGNCLSCFSSSSSSSVPEDANYPHHTA

KSRSDESDYVGKLTFNRVDMSKKIKSVIEGIYDLCSHVSNLLKITQPEERRVLSLKRPPTSSTITQNKLYGREDI

FNQTLDDMCTIRSETLSVLPIVGPGGIGKTTFAQHLYNHKRTEAHFSGNKTWVCVSTNFDVVRLTQEILMCICQN

RNEESSGAHETSNLDQLQKSIAEKLDSKRFLLVLDDMWRCSSEGEWESLLAPLKTGEAKGSMVIVTTRFPSIAQM

VKTTKPIELQGLEDDEFFTFFEECIFGQEKPACYEDELIDIARKISKKFKGFPLAAKTVGRLLKNNLSQESWMEV

HERNEWKNQQDGDGIMPALQISYDYLPFHLKKCFSYCSLYPEDYRFGNLEITYFWEALGIIAYGDQNNKADHVGL

KYLNELVGNGFLMKEGDDSRPYYVMHDLLHDLARNISSQECIDISSYNFRSDSIPQSIRHVSITLQYDEYDQSFE

RELEKFKTKIDIVNLRTLMLFGKGNANMTFFKDLLKETRSLRVLFMHANSPESFPHDFFKLIHLRYLKLKIPYGV

ELSLPNAISRFHHLNFLDLGNSICILPKDMNRLFNLHLFLARKELCSNIPGIGKMKYLQRLEEYHVKKEDIGFDL

SELGDLTELGGELTIFNLENVATTEEGNQAKLQLKRNLRRLTLIWGAVQQTTGSDVLDGLQPHYNLRALGIINHG

GPTGPGWLCSDIYLSIIY

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	202	516	4.4e-53
NB-ARC [Pfam ls]	202	516	5.8e-53

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	37	842	9e-83
Pi-ta [Oryza sativa]	70	777	1e-26
Xa1 [Oryza sativa]	154	837	1e-100
RPS2 [A. thaliana]	182	776	2e-24
Pib [Oryza sativa].	198	719	1e-33
Mla1 [Hordeum vulgare].	219	759	4e-32
N [N. glutinosa]	224	665	6e-12
RPM1 [A. thaliana]	243	736	3e-35

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	64	90

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 6165.m00036

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)