Report for 6171.m00026

 > 6171.m00026, length: 1480, copies: 1 

MERQTGSVLGTSLRREYPGLVKEYAGPGQRKRKRLAMSWGHYFGEKDHNGMTAGNRVKDEFWSFFTTQEEDMEEL

DKNIDNYCQARVPKIICQARVDAMKKYYGKGIKGKNASAIELNFEQYMTCKLDWINVDAWKCFCHWWTSDKYKEK

RKRGQDARFANEDYAQQQGGSLPFCTIQQNLVYQLGPENASGLDTYRVQMAGFKASLKGSGQIRSEKVKQRINIY

CQVYHEERGEEHQPVSSELDGNVVYKAFGGLKHGRFAMGNGVFKKTEVLAAVKHKKSGISGSTNSYNAVVRENAQ

LRHEVTEQRGMIREQRGMIQEHRGMLKKNPISKFNLHAYRQYMRSLEWTYLRRYFQGGSHKERLSIDVLIIHPFV

DLFCGGNPVTKVDGPPPSGRHNLATLVGGAGAGAASAGKECNSNAASRGQYQNFHEIPPDDADFNNLTIYLKSAS

PAQINFKFWFFCSLQFMMASSLFSYFFGMKSRILSPALPQQSYLSSAELPSLTDHVNEEVAKLDRTVRRITAVLV

DADEREIADETMKLWISELKQVTWEAEGILEDYSYELLRSTTVQEEKNILDRISKVRKFLDEICRDRVDLGLIDQ

EGLCRKESRISRCTSSLLDPLEVYGREDEKKLIISSLLDGCLTFKKRRLKEHEYETCKAGAVRLISIVAMGGMGK

TTLARLVYNDARVQNHFDIQAWVWVSEVFDEVRLTKAAIESVTAKPCDLTELEPLQRQLHEEVKGKKILLVFDDV

WNEDTIKWETMKRPFSAVATGSHMIITTRNENVSTIVQAKKVIHLGGLQKDDSWALFCKLSFPDNACRETELGPI

GRKIVEKSDGVPLVLKTLGAMLSLDTSLEFWNYVLTSDLWELGPGWDHILPILKLSYYSLPAILKRCFTFLAAFP

RGHKFDLEELVHMWCALGFIQEDGVKRMEEIGHLYVNELVRRSFLQNLQLAGSREKFVIVHDLIHDLAKSIGGKE

ILVKKCCGSSVGGCNTSANNHLRYLAVLVGTTPFYSDNKLVPFTLPVAGHFPLRSLSFQSKWRTYLRSCVRNNLR

TFFQVLVQSQWWYNLEGCLLHSPHLKYLRILDVSSSDQIKLGKSVGVLHHLRYLGICQREIPEAICKMYKLQTLR

NTYPFDTISLPRNVSALSNLRHLVLPREFPVTIPSGIHRLTKLQSLSTFAVANSGSGAATLDEIKDINTLQGQLC

IMDLQNITHDRIWEPRSANLSKKKLTRLELVWNPLPSYKSVPHDEVVLESLQPHNYIRQLVISGFRGLNFCSWLG

DRSLFSLQELELCKCYYTDHLPPLGQLPNLKQLKLTSLWKLRSIGPEFYGDCEAPFQCLETLVVQNLVAWEEWWL

PENHPHCVFPLLRTIDIRGSHKLVRLPLSNLHALAGITVSSCSKLETIVGLKERCEVTAGNGGLQAGQTNVLPSL

RRVKITACPSLEEPLISMLRRQTEIGFSYWEQSPSTSPTDIADFGKTPWKDSGKV

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	607	925	3.4e-76
NB-ARC [Pfam fs]	665	925	7.5e-77

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	484	1177	9e-40
I2 [L. esculentum]	504	1437	1e-105
Pi-ta [Oryza sativa]	534	964	1e-19
M [L. usitatissimum]	567	946	3e-16
Pib [Oryza sativa].	599	1343	6e-31
Xa1 [Oryza sativa]	614	1316	2e-66
L6 [L. usitatissimum]	662	975	2e-12
N [N. glutinosa]	662	1340	3e-14
RPM1 [A. thaliana]	664	1149	2e-42
RPS2 [A. thaliana]	664	1341	2e-26

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 6171.m00026

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)