Report for 6182.m00152

 > 6182.m00152, length: 772, copies: 1 

MANRTELATLLCIPLFSLLLLDVVAGNFTGPHQIRLRCGGTSTAIDSDGRTWEGDANSKLALDGLAANASYLDPL

LPSPVPYMTARIFSSNFTYWFGLNPGRVFLRLYFYPTEYADRAAADALFSVTAGILVLLNDFNPSQVAHAMGRTY

LILEYSVNVPSGDLDVTFSLSPHHTGSYAFVNGIEVVSTPDIFTKPAPTFLNVGISDPFPISVNIGLQTMYRLNV

GGETISPKDDSEFCRTWGKDSPYISGDSGLNFFKDDTVTISYPRTMPSYIAPVGLYETARSMGLKGYINLRYNLT

WILPIDAGFHYLLRLHFCEIQHPITKANQRTFFVYINNQTAQKMDVIVLSGGIGVPIYTNYIVGPIGYGQTDLRV

ALHPDVETNPEFVDAILNGLEVFKLQDVNKSNLAGMNPIPWSHRDGDPRLATIGGAIFVLVVLLIASLSMYIINI

RKKRVDHGNTNKELLLATLLSKKSNLCHQFTFLQIQEATSNFDEAFLLGKGGFGNVYKGELDHGMKVAIKRGDPL

SQQEHLYGSQKPPLPWKQRLEICIGAALGLHYLHTGAKQTIIHRDVKSTNILLDGKWVAKVSDFGLSKVSTDKDK

TYVSTVVKGSFGYLDPEYFRRQKLTKKSDVFSFGVLLFEVLCARPVINPELPEEQVSLRDWALSCRKKGILSEII

DPHLQGEITPQCFRKFTETAEQCVADYSMNRPSMGDVLWNLEVALQLQESAEENCEETALNVLSSPLTTRLQPSS

RSTMSISGQKAVFSEMMHPDGR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam ls]	492	715	2.3e-11
Ser/Thr pkinase [Pfam fs]	498	520	0.0042
Ser/Thr pkinase [Pfam fs]	534	647	5.9e-19

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	425	716	8e-25
Pto [L. esculentum]	478	725	1e-67
Rpg1 [Hordeum vulgare]	526	717	1e-12
Rpg1 [Hordeum vulgare]	539	747	3e-19

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	7	29	in -> out
putative TM domain	428	450	out -> in

Report for 6182.m00152

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)