Report for 6182.m00163

 > 6182.m00163, length: 533, copies: 2 

MAGLTVKLAPRDQFALPSVHTFFSLSCRLPSIATKAVRNFEFLVSWRGQQKGREYGDGANSIAAPVFVRLVLGAI

FVLVGQWEGYAFFFFFFFFFFFFFFFFFFFFFFSGDVYCGHRHFRRRRRRRQWDGRLVFGSSGASACCDRSAPPF

PPRAGHRRRPRLHRHRHDLPFHALRLDTMAAISPEHRRQDAAKGIKLVPILSRFNSVKMSRKRLVGMFEYPSLEA

ATEKFSESNMLGVGGFGRVYKAAFDAGVTAAVKRLDGGGPDCEKEFENELDLLGRIRHPNIVSLLGFCIHEGNHY

IVYELMEKGSLETQLHGSSHGSTLSWHIRMKIALDTARGLEYLHEHCSPPVIHRDLKSSNILLDSDFNAKIADFG

LAVSSGSVNKGSVKLSGTLGYVAPEYLLDAAMSISGKLTEKSDVYAFGVVLLELLMGRKPVEKMSPSQCQSIVTW

AMPQLTDRSKLPSIVDPVIKDTMDPKHLYQVAAVAVLCVQAEPSYRPLITDVLHSLVPLVPTELGGTLRAGEPPS

PNLRNSPC

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	230	435	2.8e-48
Ser/Thr pkinase [Pfam ls]	230	508	2e-46

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Rpg1 [Hordeum vulgare]	190	506	1e-26
FLS2 [A.thaliana]	218	509	2e-32
Pto [L. esculentum]	218	506	5e-50
Rpg1 [Hordeum vulgare]	218	506	2e-31

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	58	80	out -> in
putative TM domain	87	109	in -> out

Report for 6182.m00163

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)