Report for 6188.m00160

 > 6188.m00160, length: 585, copies: 2 

MGSVITVLGWLLSPIISLLVNRFISYLFDASPKIQELEIQTVPKLEQMLRKIEEERMHRKAKKERSAVQNLDTLA

KLVKSALYEAEDVLDLIAYHQIEKDVIGDDEPQGSSSKWHPHIDDAIHACKTSWIGRCITTLLEWAQGLYRSLRS

RSAALLPISCSRCCGSASDSLLERLSCLSRQFDFIRCCQSLFIWSVNWFEVARSYRDWFYDATGITATGYQLEDG

TAVYSFMPAIARWKLRKRIEKLENTVTNVENSPYLTQTSSGAWNDIVNMNRRSITSSSTRKVFGRDRERDMIRSM

LREDDSLPSSSSRKCYSVICIYGIPGSGKTTLAQYVCEYEKEDKDRYFDTVMLIYVSKTYRLEDIFRDMLEEITQ

SRHSEISDCRGLEAKLVENLRGKRFLLVLDDLWVNDENHEKLLSPLNVGKSGSRILVTAQSKEAALGSNRLIPIS

DLEEEQYFSMFMHYALDSTIFDDREYIPIGRKIAKKLNRSPIAAVTVAGQLWRNPDIRFWQTTANLDVLNKTKGA

LWWSYNQLVVDVRRCFQYCSIFPRRYELERDNLVRMWIAQEFVKDNDGNNEDVEDVGQSL

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	274	573	9.7e-31
NB-ARC [Pfam fs]	318	433	2.8e-22
NB-ARC [Pfam fs]	529	573	4.7e-11

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Xa1 [Oryza sativa]	44	582	9e-31
RPS2 [A. thaliana]	236	575	4e-16
I2 [L. esculentum]	276	578	9e-33
Pib [Oryza sativa].	276	567	4e-12
Mla1 [Hordeum vulgare].	287	575	1e-17
RPM1 [A. thaliana]	318	580	2e-28
Pi-ta [Oryza sativa]	318	581	5e-12

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 6188.m00160

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)