Report for 6188.m00172

 > 6188.m00172, length: 1188, copies: 1 

MEGSMFNLPGRLDRLLRRHGSMLPKGAEEEIPLIKQDLEEIISVLHGHCSKPKLEDHAMVVRCWMKEVRELSYDI

EDCIDQYEHAATATRSHTGPNICRRKFNQRHGKMIPWVPWKLKQRLWMANKIREFSLRTQEALQRHTMYNNLGGI

TIASTTGGDVCSATPWHPTQFREHTDNVCSVGIDADGMEAALNDLNKLKNLLASIPTASLVQFREHANKVRHIHP

DVEAILNKLKNIPTGITTTSTTTRGDVSSTSSRQPTRFMESAGLVGINAAVNKLENLLDVCGEEKLKVVSIVGVG

GVGKTTLANKLYCKLQRQFECWAFVQTSQKTDMRRLLINILSQVQPHQSPDNWKVHSLISSIRTHLQDKRYLIII

DGLWATSTWDVIKCALPDGNSSSRILTTTEIEDLALQSCSYDLKFIFKMKPFGEGDSRKLFFSIVFGSHSKCPPE

VSETLYDIVRKCGGLPLAIVTVASLLASQLEKQEQLDYINKSLGYGLMANPTLEGMKQLLNICYNNLPQHLKVCM

LYLSMYQEDHIIWKDDLVSQWIAEGFICATEGHDKEEISRAYFDELVGRKIIQPVHIDDSGEVLSCVVHHMVLNF

VTYKSIEENFIIAIDHSQATIRFADKVRRLSIHFSNVEDATPPTSMRLSQVRTVAFFGVLKYMPFVMEFRLIKVL

VLHILGDEDSIGIFDLTKISELVRLRYLKVTSNVTVKLPTQMQGLPYLETLKIDGTISEVPTDIYLPRLLHLTLP

AKTNLPSGIVHMTSLRTIGYFDLSCNSAENLWSLGELSNLRDLQLTYSEIHSDNLKDNMKYLGSILGKLRNLTSI

TLSPPGSSCPDTLHIDRTRINVDGWSSVSSPPALLQRFELLPCVCIFSNLPNWIGQLGNLCILKIGIREVTSNSI

DVLGVLPKLTVLSLYVHTKPAERIVFDNAGFSILKYFEFICSVAWMKFEMGAMPSLRKLKLGFDVHIADQHDIIP

VGIEHLSGLEEISAKIRVACTAHDHCRRFAESALTNAFMMHPGRPSVNIRCVDWTFHDKDNDCVGTREEECRTPM

KQEHFVKEDLSEKSAVLQNEHDEEAHKFVDRRYYPIMDAAEIRRCPWSVNEEQEQPVLIYDARTKISQSSSMHSE

FWAAVQRLTGPAATPAKTKRHLHLTTSPELEDGFLPLFKRSEFRGIELGDVLVCDESCASGRL

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	253	557	1.3e-45
NB-ARC [Pfam ls]	253	557	3.8e-45

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	183	1025	2e-85
Xa1 [Oryza sativa]	215	855	1e-24
I2 [L. esculentum]	222	961	2e-36
Pib [Oryza sativa].	253	775	2e-44
RPM1 [A. thaliana]	263	987	3e-43
Pi-ta [Oryza sativa]	269	815	1e-141
RPS2 [A. thaliana]	279	915	2e-19
Pi-ta [Oryza sativa]	871	1037	5e-28

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 6188.m00172

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)