Report for 6192.m00193

 > 6192.m00193, length: 874, copies: 1 

MEAALLDVSEAPIDQPPNNQVKLWARNVRELSYNIEDSIDKFMVRIDTHAAPHKLHSFRDFIDRSLDLLTKAKIR

HSIGTDIKDIKSRIKEISERRDRYKVDNVVTVPFSPTVDSLRLSALYKKMTELVGIEEKSDELVKMLMEGDKQEL

KIVSIVGFGGLGKTTLAKVVYEKLKVQFACGFFVTMSLNPNMEKIFSNMLCQLDKEKYSHVTKASWGEAQLINEI

REFLQNKRYFIVIDDIWSNVVWETIKYTFLGNECGSKIITTTQILDVAKEVGGVYQLKPLSPAVSRKLFYQKIFG

AEGRCPVQLAVVSEGILKKCGGVPLAIITIASLLASKNDRDNILEYWSKVYHSIGSGLEDNLHVNNMRKILSVSY

YNLPPHLRACLLYLSCYPEDTNIGNKDVIWKWICEGFVRAEHMKTLHVVGMEYLNELWNKSLIQPISNCDNMPWD

YCLHDMVLDLITFLSNEEQFMTSLGDQQPMLVPHKIRRLSLQSIKQEYFKLISNADLSHVRSLIVSKQAFSLLPN

LSSFPVLRVLDLSGCDQVDNRHCRDICNTLHLRYLNLHRTSISEIPEEIGNLQFLLVLDITKTRLREVPSTFVQL

QQLVDLCVGPGMRLPDDFGNLKTLQSIWPHIYVMSPTMLRNMGGLTKLRHLSIRFHEWDESYQKSFELCLSNLVN

LRSITVRVYEGVMDSKCENLSPGPQQLEDIDMNRSVANSVPIWMSSLSFLSSLDIKLKTLGHKDLQILGNMPSLS

DLTLWVNEPTQDRHERLVIDNCYPFHCLTFLKLMANNMEVAFAQGPMQKLQKLRFGFGVRKTVDQFGNFDFGLEK

ISVEHLDVCVNYSDANRWEVNAAEAAIREAVNMNPNNPTLKLTTLFVLL

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	112	418	3.4e-57
NB-ARC [Pfam ls]	112	418	2.9e-57
LRR [Pfam ls]	556	578	0.0058

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	509	530	4
LRR [sensitive, ls]	509	530	44
LRR [sensitive, ls]	556	578	0.00053
LRR [sensitive, ls]	556	578	0.0058
LRR [sensitive, ls]	579	601	1.5
LRR [sensitive, ls]	579	601	17

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	1	865	1e-142
I2 [L. esculentum]	8	754	2e-39
Pib [Oryza sativa].	10	297	4e-15
Pi-ta [Oryza sativa]	10	584	2e-68
RPM1 [A. thaliana]	27	803	2e-54
RPS2 [A. thaliana]	82	594	4e-25
N [N. glutinosa]	87	706	1e-11
Pib [Oryza sativa].	116	603	6e-53
Xa1 [Oryza sativa]	130	678	2e-27

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 6192.m00193

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)