Report for 6201.m00159

 > 6201.m00159, length: 783, copies: 1 

MKVDGTIQNISDIVPVPSELATRARKIMDMFNEIKDYASKFSLSENDGVRRSIPDMHQVRQTSSMVFEQSIIGRG

SIKDTVIEKMLSQNKSSTPESHVSVLGIVGMPGVGKTTLAQLVYNNTEVCKSFDVRVWVCVSENFDVKEIQDKRF

LLVLDDVWNERRDYWEMFRLPMLTTKLCKIILVLVQTTGFWMKNMQIIQVYKKLAKILFQCGKGLPLAIKTIGSM

LRYEPDETKWKDILESDLWDLEQSQNEVLPALELSYKQMPMYLKRCFIALSLFPKDYILHEENVVLLWEPLELLQ

HGDGANKAKLAVSYLHELAQSAYKMHDLIHDLACFLAGDEFVRTEDSSDSLKAIIVIGHGLDEIVIPDDIFLKFK

RLRVFSLNGAAPTNLLPDSAGNLKLLRFLRLRCSIDCQIMQLPKSVFQLFNLHTLELMKPAFDLYTPIVSGIGRL

IKLETLPPLEILSGYDSNLSELRNIRKVRSLSLKGLDYVCSVEDAMEADIPSKIHLQSLNLDFTSSHHQQLQQHK

PGAVSHKELLESLQPCHTLRDLSIYGYRGLTFPCWVGNTSFSKLTKVVLSKCEWECLPALGELPSLESLEISRMY

NLRFIGREFCCLNQSVKVFRSLVNLSFSWMYELSEWSGVKDGDFACLETLLLCQDNKLRFLPLVPFSSLVTCRLS

NCGNLVTVPVSYALCDLYINDCASLIELPSLPSLIKLKISNCSSLGATIPMFPALQYLSIKDCASLLELPTLPSL

MELNISNCSGLGATNPYVPSPSVSKYQGLCEST

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	55	146	4e-21
NB-ARC [Pfam ls]	55	304	7.7e-31
NB-ARC [Pfam fs]	199	304	4.5e-24

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	1	782	3e-74
Xa1 [Oryza sativa]	1	759	9e-39
RPM1 [A. thaliana]	20	549	3e-27
RPS2 [A. thaliana]	69	755	5e-16
Mla1 [Hordeum vulgare].	71	348	4e-16

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 6201.m00159

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)