Report for 6201.m00162

 > 6201.m00162, length: 793, copies: 1 

MAALFASLAVRKALDTLSSLLPASLAASSSSSAANRARQEQDLEDMRMLERTMRRIHATLHDVEQHWDIHEESTK

LRLKELKELAYDAEDVVEEYEYEVNRCKVEALELSASTADHKRKRQQNLENEDLFNSGMVAVPDELAVKTRKLIE

RFHEIKYYSDNFTLSDNDGERRIIPHISMLRKTSSLVFAKSILGREGDKNTIMEKLLPRDGDSVANPISVLAIVG

MGGVGKTALAQLVYNDSRMRGSFDKHAWVCVSEQFDVINITKGIIQSLKKEECGLPEHSLDILQQILVAEIKGKK

VLLVLDDVWSERRDCWELLCLPMNTTEICNIVVTTRSERVARLVQTMPDFYNLNCLSPDDSWTLFKQEAYANQGS

GIPSNLVEIGRRIAEKCKGLPLAIKTLGSILRFETNEKKWRDVLDSELWNLEQSHKEVLPALELSYKHMPIYLKH

CFVSLSLYPKDSPFNVFMVSRLWKSLDLLHCDGIGNWEEIGSLYFTELVQRSLLQNYMHGHTFVMHDLVHDLACF

LAGDEFFRPEGDKSTEIPLGTRYMSIVPHTKSIKISNSSESLRAVVTLGNIDIENPEALFLNCKKFRVIQVTEDG

FAKVLLDCIGEMKLLRHLEFLGHSNAVELVISNSVSKLFNLQTLNFIACSLHGIGRLVNLQALPVIHLCNCGCFF

NIRELRNMHKIRKLRIDGLCNVSSIIDANEALLHCKKDLQELELNFTASINDAHTQNAGSNQAIIAVSVDLLLES

LRPHHRSLRELTLQNFNCKIYPSWLGSTSFSKLIRLVLRLCRS

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	176	484	1.1e-72
NB-ARC [Pfam ls]	176	484	3.1e-73

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	35	792	7e-75
RPM1 [A. thaliana]	60	645	2e-40
Mla1 [Hordeum vulgare].	71	691	2e-33
Pi-ta [Oryza sativa]	79	505	4e-20
N [N. glutinosa]	155	539	2e-14
M [L. usitatissimum]	164	522	4e-15
Pib [Oryza sativa].	168	667	5e-27
L6 [L. usitatissimum]	178	598	9e-14
Xa1 [Oryza sativa]	183	791	5e-63
RPS2 [A. thaliana]	190	632	3e-15

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	76	98

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 6201.m00162

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)