Report for 6202.m00141

 > 6202.m00141, length: 500, copies: 1 

FTGSLPDALPDTLQSFNASYNDLSGVVPVNLRKFPESSFHPGNSRLDYPASSSGSGSSSGSAGGRSLSAAAKIAL

IAASIVALVILILVAIVCHYKQISRQFPSSEKVSDKNLHKTSKDMASTKGKDDKGGLVVSADELGAPRKGSTSEA

LSQEEKLSGVGGFSPSKGSRFSWSPDSGEAYTQEGLARLDVRSPDRLAGELHFLDETITLTPEELSRAPAEVLGR

SSHGTSYRATLENGVFLTVKWLREGVARPKKEFSKEAKKFANIRHPNVVGLRGYYWGPTAHEKLILSDYVSPGSL

ASFLYADRPGRRGPPLTWAQRLKIAVDVARGLNYLHFDRAMPHGNLKATNILLDGLDLNARVADYCLHRLMTQAG

VVEQILDLGVLGYRAPELAASKKPSPSFKSDVYAFGVVLLELLTGRCAGDVVSGSEGGVDLTDWVRLRVAEGRGS

DCFDPAMASDSENQVSVKGMKDVLGIALRCIRPVSERPGIKSVYEDLSSI

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam ls]	217	499	7.1e-13
Ser/Thr pkinase [Pfam fs]	251	426	4.9e-18

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	212	500	6e-20
Rpg1 [Hordeum vulgare]	220	421	7e-12
Rpg1 [Hordeum vulgare]	222	500	5e-19
Pto [L. esculentum]	223	493	5e-21

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	73	95	out -> in

Report for 6202.m00141

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)