Report for 6210.m00184

 > 6210.m00184, length: 930, copies: 1 

MAEALVFIVLQKIGAALGREALNVVGTQLQKQPPTLVDVENNMRQLKIEFHVMKAFLTQQQIHFSQDRAYDAWLD

EVKNVAHEAEDVIDEYVYLAGQTAKETSKLKKLFHCSKTTSDWHIIATQLSQIKSRLQNLTNMKARYGISANDSE

DGSTSSHESLKELTSDSAYFDTEDDMVGNKEESEKVMKLLIHGEETRTVISICGMGGLGKTTLARAIYKKNEIRK

NFDCFSWITISQNYKVEDLFRRILKQFLDMNENIPDQTDIMYRVSLVERLRNYLQDKKYLIFLDDMWSQDAWILL

DRAFVKNKKGSRIVITTRNEDVASIANNGCSFKPKYLPWGDAWDLFCRKAFHRLDQNGCPQVVMHWAEKIVSKCE

GLPLAIVAIGSLLSYKQIDEAEWKLFYGQLNWQLTKNQKLNYVTSILNLSFDYLPANLKNCFLYCSMFPEDHEIR

RKQIIRLWIAEGFIEERGDITLEEVAEDYLKELVQRSLLQVAWTKEYERPKSFRMHDLVRDITVTKCKTEKFSLL

ADNTCVTKLSDEARRVSLVKGGKSMESGQGSRKIRSFILFDEEVQFSWIQKATSNFRLLRVLSLRYAKIVKLPDA

VTYLFNLHYLDLRHTEVQEIQQSIGKLRKLQTLDLRETFVEQLPEEIKFLTKLRFLSVDVDCDPSNLHRHFPRFQ

ATRICSEFYLLTDLQVLGDIKAGKHVVTNLSRLTQLRCLGICDVKQDHMEKLCVSIKSMPNLVRLGIVSHGEDEI

LDLQHLGHVPDLEWLHLRGKLHGAGATSNLQNFSKLRYLSIGWSRLQVDPLPAISHLSNLAELYLQKAYDGLLMT

FQAGWFPNLRELGLADMDQLRSIDIEAGTMPNLSILVLCGLQNMISVPVGFKYLTSLQILRLWDMPKEFMERTHA

EDHVYVKHIHQIRYHALRVKRWKFTNLSIN

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	159	469	2.2e-90
NB-ARC [Pfam ls]	159	469	6.1e-91
LRR [Pfam ls]	606	628	0.26
LRR [Pfam ls]	629	651	1.1

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	583	605	1.1
LRR [sensitive, ls]	583	605	28
LRR [sensitive, ls]	606	628	0.01
LRR [sensitive, ls]	606	628	0.26
LRR [sensitive, ls]	629	651	0.042
LRR [sensitive, ls]	629	651	1.1
LRR [sensitive, ls]	785	808	0.53
LRR [sensitive, ls]	785	808	14
LRR [sensitive, ls]	833	859	1.1
LRR [sensitive, ls]	833	859	29

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	13	658	1e-58
RPM1 [A. thaliana]	29	915	1e-121
Mla1 [Hordeum vulgare].	39	820	2e-65
Pib [Oryza sativa].	52	325	1e-17
Pi-ta [Oryza sativa]	67	660	4e-47
Xa1 [Oryza sativa]	110	898	4e-41
RPS2 [A. thaliana]	111	658	5e-42
L6 [L. usitatissimum]	129	512	5e-16
Pib [Oryza sativa].	132	883	1e-56
M [L. usitatissimum]	147	495	1e-15
N [N. glutinosa]	175	654	6e-15

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 6210.m00184

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)