Report for 6234.m00126

 > 6234.m00126, length: 767, copies: 1 

MNVVLEKLADMERLDGQQKLWRDNVREMAYDIEDCIDVFMYHLGDGHNKDGLLQKTARKIRKLRVRYQIANKIQE

LKARVMEVAQRRSRYIGLGEATTSCPKVVEIDPRLPALYEAAKNLVGIDGPREEISRWLTEEGQSGPTQQLKVVS

IVGFGGLGKTTLANQVYKQVKDKFNCTSFLSVSKNPDVLKLLKNLLLEVQKKEIIIKSSLTPSEFTKFPDDNQKL

IDTLREHLANKRSRTGNRNVNHWMHGQLIDVPNFQSNKLECPKDHDKKNLFVEDMLRKCKGVPLAIISIASLLAS

HGMNVERWEKVQNYLGYELETNPTLEWMRHVLNLSYSDVPHDLRACFLYLGIYPEDSKIFKVDLTRLWIAEGFVE

EKAGLDLEEAADSYFNELINRSLIEPNNNRLGEVVSCRVHDLMLDIILSKCQQENFITVATKQSILNDRGFPVRR

LCCQLSYENLEMERMEVSQVRSFITFPVRGCSTQPPISKFEHLRVLKLVAYVAPTLLDLSADQRVPVDNASENWE

TPVFEDARSTMQPFGDWNDVTSLIELRCRHVSSGQPYSSKVITRLRTSAPPIWVIIRRAFWMVHRLIIRKSIHTV

PEWMEQCDKLTMLEIRVKQLQSTGVHVLSNLPCLIDLDLTAQATPEDDIEIYTHRFPKLEKFILACDFLPCLKFC

IGAMPQLQTLKLDDRRPAQLEQGCSSSSGAAAAQYGSSPLVGIEHLLKLEEVEVTANSSKVSAYRDAVQRHPRIQ

DIHVTFNTHDGSARTPK

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	105	201	1.6e-12
NB-ARC [Pfam ls]	105	379	1.9e-16
NB-ARC [Pfam fs]	283	379	2.4e-23

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	1	421	9e-27
Mla1 [Hordeum vulgare].	1	498	7e-72
Pi-ta [Oryza sativa]	15	747	2e-56
RPM1 [A. thaliana]	24	454	2e-37
Pib [Oryza sativa].	125	432	4e-36
Xa1 [Oryza sativa]	140	434	3e-17

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 6234.m00126

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)