Report for 6236.m00137

 > 6236.m00137, length: 558, copies: 2 

MEATAVSIGRSVLKGALGFAKSTLVEEVSLQLGVQRDQAFIRDELEMMNSFLMAANDEKDDNKVVRTWVKQVRDV

AYDVEDCLQDLAVRLGRKSSSWWLSPHTLWERRRIAKQMKELRGKVEDVSQRNMRYQLIKGSKPTVATNVAPSST

ARATMSGVHEERWQHDKAVAGLVRLVIKTKVDELRVIAVWGTSGDIREMSIVGGAYDHLKRSNKFECCAWVNLMH

PLNPTKLLQTIVRQFYVRSLQEAGKATPSCQILSSMLIKEDHLNDEFNEYLSDKCYLVMLNDLSTAEEWKQIKML

FPDNKKGSRIIVFTQHVEVASFCARTEEVAPEQMQLFADQTLYAFRCKGAKDGVDSMEDSSNLNEDTTYNAVEGK

SLPRTYSMVTAFKESEIVGRVDEIKEIIELISKGSQQLEKISVWGMGGIGKTTLIQNVYRSEKVKKMFDKHACVT

IMRPFNLNDLLMSLVRQLEDSKTSGEKELASILEGKKYLIVLDDVLSTTEWNAIESYFPAMETGSRIIITTRHES

IAKHCSGDQQGKIYQLNRLGDSDAKNLFAKKVT

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	376	557	2.7e-32
NB-ARC [Pfam ls]	376	557	2.4e-07

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
RPM1 [A. thaliana]	17	322	8e-15
Pib [Oryza sativa].	47	557	1e-112
Pi-ta [Oryza sativa]	358	553	2e-16
RPM1 [A. thaliana]	387	556	5e-16
I2 [L. esculentum]	389	534	8e-18
M [L. usitatissimum]	391	555	1e-12
Mla1 [Hordeum vulgare].	392	557	5e-15

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 6236.m00137

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)