Report for 6236.m00139

 > 6236.m00139, length: 632, copies: 1 

MATEEGAEPSAPIAEDRGALSASAPAPQLPLSAPAVSSRQVPNTVDATKAAAAARALQIRAEILSTSQPLVPQAV

SSQLATASTTLAAAQVNPNLEEQQQAYETARQAKVATAPILQYSAGYIPPQVYPAELETNPELEAIRAVLNISYD

GLPYHLKSCFLYLSIFPEDDKISRKRLVRRWCAEGYSRELWDKSAEEIANNYFFELIDRSMILSTQNSTYSSRGA

DSCQIHDIMREIAILKSKEENLVLRLEGGRRLHNHDTVRHLSITNSSEDWETDVGELKTTVDMSRIRSLTVFGEW

RPFFISDKMRLLRVLDLEDTEGVRNHHIKQIGELLHLRYLSLRGCMHIAYLPDSLGNLRQLETLDVRASVIVKFD

TGINTRDICCLFCCGILPSIAMRLQGNGVVAPRGLRRLTALHTLGVVDISWQPSILQDIKRLTHLRKLEVTGVNK

KNSKKFLSALAALSRLESLSLISKGKLGLWGCLDAEEKFSPPKDLKSLKLHGNLVELPKWIGKLNNLVKLKLSEI

GLKDHDAAIQVLGKLRNLSIHCLPRKSFHSLEGGELNFSEGSFKSLVVLKLHFGGSKCVKFQQGAFHDLELLVLS

GYIEEVGTKFSGLEFLPRIKEVQLHDYFYDVN

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	137	185	7.2e-17
LRR [Pfam ls]	336	359	0.31

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	336	359	0.014
LRR [sensitive, ls]	336	359	0.31
LRR [sensitive, ls]	494	521	1.5
LRR [sensitive, ls]	494	521	34

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Pi-ta [Oryza sativa]	122	372	1e-29
Pib [Oryza sativa].	130	628	1e-118
RPM1 [A. thaliana]	131	618	1e-27
Mla1 [Hordeum vulgare].	132	590	1e-32
I2 [L. esculentum]	141	364	2e-12
Xa1 [Oryza sativa]	141	366	2e-12

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 6236.m00139

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)