Report for 6239.m00104

 > 6239.m00104, length: 467, copies: 1 

MDATGPPPPPTAVGSDVDGGTGSGGARTTTFFGLSTSALVAAGAAALVLVVVLVAAGTARLCARRRRGAKHLSMS

RVEHAPSSGSLRQASSSSAPKEKDHAEAGAGTGTGTSSSDVASSSAAASYLESPVRRKPERISCAAAMDMGWGRW

YDLEELEAATGGFSEENVVGEGGYGTVYRGVLAGGEVVAVKNLLDHKGQAEKEFKVEVEAIGKVRHKHLVGLVGY

CAEGPKRMLVYEFVENGNLEQWLHGDVGPVSPLTWDIRMKIAVGTAKGIAYLHEGLEPKVVHRDIKSSNILLDKK

WNPKVSDFGMAKVLGSGSSYVTTRVMGTFGYVAPEYASTGMLNESSDIYSFGVLLMELISGKRPVDYSKSVGEVN

LVEWFKGMVGSRRVEQLVDPRIEDPPGARALNRVLLVCLRCIDSDAHKRPKMGQIVHMLEGDEFPFRTLRWLLAE

SKVFSDSPAFDPDYEKL

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	163	434	1e-49
Ser/Thr pkinase [Pfam ls]	163	436	6e-50

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Rpg1 [Hordeum vulgare]	133	434	1e-37
FLS2 [A.thaliana]	151	435	1e-41
Pto [L. esculentum]	151	435	6e-56
Xa21 [O. sativa]	154	249	6e-11
Rpg1 [Hordeum vulgare]	156	435	4e-32

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	39	61	out -> in

Report for 6239.m00104

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)