Report for 6242.m00122

 > 6242.m00122, length: 899, copies: 1 

MPTNPMWANLSTTSNIQEESTMFGVPSAILQKAVTVAGNGTMLNIMSEDRSFFEFMVFLHLADFQDNKIRQFNVY

FNSDNPLPYIPQYLAADYVYSRNWYSSTDGKFNITLAATAKSLLPPMLNALEIYTLVAHSTPTTFSKDFDAIMAI

KFEYGIKKNWMGDPCSPSRFAWDGVICRNTSDNIPRIISLDLSNSNLHGVISNNFTLLTALENLNLTGNQLNGTI

PDSLCKLNAGSFIFSYNSDQDLCKKTSPSSSRSRATILAISIAAPVMVVAILGLSYLIWRVKRKSNIFAYNPPRV

PEPTNASRNEKYHWDHLQENENRQFTYKELEKITDNFQLIIGEGGFGRVYHGRLEDNTEVAVKMLSGTSSSGFNG

FLAEVQSLTKVHHKNLVSLVGYCSEKAHLALVYEYMSRGNLFDHLRGKSGVGENLNWAMRVRVLLDAAQGLDYLH

KGCNKSIIHRDVKTSNILLGQNLRAKIADFGLSRTYISDSQSHMSATVAGSMGYIDPEYYQTGWITENNDVYSFG

VVLLEVVTGELPILQGHGHIIQRVKQKVDSGDISSIADQRLGDDYDVNSMWKVVEIALLCTEPVAARRPSMAAVV

AQLKESLTLEEARQERGLKENPTDDVVVAMVPTFDYWRSGFGNDWNFLVLEMIGFNRFGPAPNPHVAHVNANPHI

PPPMHNIYNAPNHAYGGYPQDARYDQYNHIVPPQPPIPRPPNPQPRPENMDEKIRNIIREAFELKPRNRAKVYQK

SYPDNFDNIPYHRTFRVPEFTKFNGENGSIGHRGRTMVLIRLEQVVSTKGKEVVVEEPRPKMIVPKSPEVGVWKE

NKGETSSSRTPRKPMVSFDMLLNKYEKKGVEQRHNKGRSDAPQGNDMIATEWRRYRREEQLEAAAVVATFVAGG

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	186	209	1.9
LRR [Pfam ls]	210	233	0.12
Ser/Thr pkinase [Pfam ls]	337	605	7e-41
Ser/Thr pkinase [Pfam fs]	340	537	3e-46

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	186	209	0.074
LRR [sensitive, ls]	186	209	1.9
LRR [sensitive, ls]	210	233	0.0045
LRR [sensitive, ls]	210	233	0.12

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	168	603	1e-41
Xa21 [O. sativa]	189	420	2e-14
Pto [L. esculentum]	321	612	5e-53
Rpg1 [Hordeum vulgare]	321	603	4e-32
Rpg1 [Hordeum vulgare]	324	603	7e-23

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	262	284	in -> out

Report for 6242.m00122

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)