Report for 6261.m00175

 > 6261.m00175, length: 407, copies: 1 

MAKTLDQLKSKEENKALIPVVGKSNHKGAIIGGILGGVAFLLLGLLALFWTRQSKKPLKPRRGDILGATELQGPT

SFYYKDLKVATNNFSEQSKLGEGGFGDVFKASLKNGKTVAVKRLTVMETSRAKADFESEVKLISNVHHRNLVRLL

GCASKGSECLLVYEYMANGSLDKFLFGEKSVALNWKQRFNIIIGMARGLAYLHEEFHVRIIHRDIKSSNVLLDDE

FQPKIADFGLARLIPDDHSHLSTNFAGTLGYTAPEYAIHGQLSEKVDTYGFGVVTLEIIGGRKLNDARLEPDSQY

LLEWAWKLYEDNNLIELVDRSLDPEEYNHEEVKRTMEIALLCTQSAVTSRPMMSEVVVLLLTRNALEFQPTRPTF

IDATRRVPGETSTSSSSSASKATVSISQLSAR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	89	296	9.3e-56
Ser/Thr pkinase [Pfam ls]	89	362	2.5e-51

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	23	361	9e-35
Xa21 [O. sativa]	59	178	1e-11
Rpg1 [Hordeum vulgare]	70	357	4e-31
Pto [L. esculentum]	77	357	2e-50
Rpg1 [Hordeum vulgare]	82	357	3e-27

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	29	51	in -> out

Report for 6261.m00175

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)