Report for 6269.m00135

 > 6269.m00135, length: 1475, copies: 1 

MLENAEGRDIRNGALDQLLSQLRDLAYDADDVLDELDYFRIQDELDGTYEAVDDAEEERGLVRGLALHARHTARA

IARKLKCTCSASARSHADAEEGRCLPATAVGKLLPCCSPPTVHNDDAAGAKTNEQHLQAPKLKFVRVEMSKKMSE

IVEQLKPVCDAVDRILGPLQPSGHSKNAKTQCIDLEKRPKTTPTIIEHELFGRKDLKRIVADEIMIGKYRDNDIT

VLPIVGPGGIGKTTFTQHIYEEVKNHFQISVWICVSQNFNANVLAKEIVEKMPKGNNEKENESDQEKIEKRIQSQ

QFLLVLDDVWEYHEDEWKTLLAPFRKSGTKGNMVIVTTRKQKIAKMVESTDCSIKLDRLDHEDSMRLFQACVFDN

NKTWEDYPSGLQKVGVDIVDRLKGFPLAIKTVGRLLRNKLTLDRWTRVYESKEWELQPNDDDIMPVLKLSYNYLP

FHLQQCFSYCALFPEDYRFCGQELINLWIGLGLLGTDDQNKTMEYLGLEYLDQLVDNGFFEQVGKEHDSPYVMHD

LLHELATNISSHEIRCLNSSTLSSINEIPKSIRHMSIIVDNRHVENRIAFENHKKDLSTLGNKLKAGNLRTIMLF

GEYHGCFYKIFGDVLIDAKSLRVIFLSGASYDVGDVLCNFSELVHLRYLRIKDSRMCGASLPNSITRFYHLLVLD

LQEHYGELGFPRDMGNLLKLRHFLVHDDNIHSSIFEVGKLNFLHELRKFEVKREMKGFDLEQIGRLLVLRGSLGI

YNLEKVEGIKEANDAKLAYLNHLDSLVLDWDNERCNRDPIREGNVLENLKPHDNIRELHIAGHGGVSCPNWLSGD

LSIRNLESLLIKYVNWDTFPLPGKLYMTEGQERQGSVTSHDFHNLKRLELVNIQKLKRWHGDGTINLLPHLQSLT

ISDCPELTELPLSDSTSCQFQQSTICFPKLQKIKISECPKLLSFPPIPWTNSLLYVSIQGVDSGLEMLNYSKDES

SLYITGKDAPGSMFWNMLDFNNLTELQEMNITKCPPISLDHLKMLTCLKTLQITDSGSILLPVDCENYVQYNLPV

EKLIIRSCGTRGRELTHVLSHLPKLSTLLIWKCQNVARLGVAEQRTITTPESSLSPSANKAAKTLTTIPQQQTGE

AEEMETATADDGLLLLHPQIKVFEISECRELSLDSGGIQGLLSLQTLGIYDCPKLLCSSSSSYSPFPTSLQTLQL

WNVEGMETLPSPLPNLTFLYISHCGNLRGGEVLCNLLAQGNLTSLYVHKTPNFFLGLEHSCSQVDKQEDVHRSWR

LQELSTDDFARVLATPVCHLLSSSLTKLDLRWNDEVECFTKEQEKALHILTSIEDLEFSRCKKLQSLPTGLSEIP

NIKTLGIYGCLAISSLGNLPNSLQQLEISSCPAISSLGNLPNSLQRLGISYCPAISSLGNLPNSLQQLEISSCPA

ISSLDGTTIRSLAKDRLPTTLREIDVRYCGNEELKRQCRKLQGTIPIVKA

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	183	489	1.7e-71
NB-ARC [Pfam ls]	183	489	4.8e-72
LRR [Pfam ls]	895	919	5.2
LRR [Pfam ls]	1414	1438	4

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	895	919	0.23
LRR [sensitive, ls]	895	919	5.2
LRR [sensitive, ls]	929	952	3.1
LRR [sensitive, ls]	929	952	71
LRR [sensitive, ls]	1152	1173	2.7
LRR [sensitive, ls]	1152	1173	61
LRR [sensitive, ls]	1215	1237	0.41
LRR [sensitive, ls]	1215	1237	9.2
LRR [sensitive, ls]	1327	1350	0.38
LRR [sensitive, ls]	1327	1350	8.5
LRR [sensitive, ls]	1372	1398	0.33
LRR [sensitive, ls]	1372	1398	7.3
LRR [sensitive, ls]	1414	1438	0.18
LRR [sensitive, ls]	1414	1438	4

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Xa1 [Oryza sativa]	127	1431	1e-120
I2 [L. esculentum]	142	1429	1e-105
Mla1 [Hordeum vulgare].	148	780	2e-33
Pib [Oryza sativa].	197	697	3e-30
L6 [L. usitatissimum]	199	463	3e-12
M [L. usitatissimum]	199	1027	7e-19
N [N. glutinosa]	222	562	7e-15
Pi-ta [Oryza sativa]	224	675	8e-23
RPM1 [A. thaliana]	226	656	1e-30
RPS2 [A. thaliana]	226	946	3e-31
Xa1 [Oryza sativa]	877	1381	7e-15

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 6269.m00135

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)