Report for 6269.m00139

 > 6269.m00139, length: 680, copies: 1 

MEFTVSAARWVVGRALGPVTGELMEAWAASKKLGPNIRELKLLLLHAQAMLENAEGRDIRNGALDQLLSQLRDLA

YDADDVLDELDYFRIQDELDGTYEAVDDAEEERGLVRGLALHARHTARAIARKLTCKWNADALVPVDDAEQGRCL

SATAVGKFLPCCSPPTVRNVDSTAAKANEQHLQAPKLKFVRVEMSKKMSEIVEQLKPVCDAVDRILGPLQPSGHS

KNAKTQCIDLEKRPKTTPTIIEPELFGRKDLKRIVADEIMIGKYRDNDLTVLPIVGPGGIGKTTFTQHIYEEVKN

HFQISVWICVSQNFNANVLAKEIVEKMPKGNNKKENESDQEKIEKRIQSQQFLLVLDDVWEYREDEWKTLLAPFR

KGGTQGNIVIVTTRRPGVAKEIDSTNCSIKLDRLDHEDSMRLFQACVFDNNKTWEDYPSGLQKVGVDIVKRLKGF

PLAIKTVDYRFCGQELINLWIGLGLLGTDDQNKTMEYLGLEYLDQLVDNGFFEQAHTCTGHLHLTFQAHGAPDVP

QPLSHDDEHIPATLEVNKGDGLRHTSHGENEDDVNQVDGLRLTKNDQAYYGPITCSHTRKIQQEVNSLFAQLNPN

FSENFILPKCSTFVLLRFTPEDIITTPRRMGYVEGDKGYVEEEPAHAQPVAVYANKKMVYAAKDSTSKACATQPV

NFLHA

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	233	457	6.4e-41
NB-ARC [Pfam ls]	233	546	5.6e-25

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Xa1 [Oryza sativa]	9	457	8e-46
I2 [L. esculentum]	192	457	5e-30
Mla1 [Hordeum vulgare].	198	465	1e-13
Pib [Oryza sativa].	247	457	9e-11
RPS2 [A. thaliana]	276	555	2e-11

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 6269.m00139

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)