Report for 6269.m00141

 > 6269.m00141, length: 1504, copies: 1 

MEFTVSAARWVVGRALGPVTGELMEAWAASKKLGPNIRELKLLLLHAQAMLENAEGRDIRNGALDQLLSQLRDLA

YDADDVLDELDYFRIQDELDGTYEAVDDAEEERGLVRGLALHARHTARAIARKLTCKWNADALVPVDDAEQGRCL

SATAVGKFLPCCSPPTVRNVDSTAAKANEQHLQAPKLKFVRVEMSKKMSEIVEQLKPVCDAVDRILGPLQPSGHS

KNAKTQCIDLEKRPKTTPTIIEPELFGRKDLKRIVADEIMIGKYRDNDLTVLPIVGPGGIGKTTFTQHIYEEVKN

HFQISVWICVSQNFNANVLAKEIVEKMPKGNNKKENESDQEKIEKRIQSQQFLLVLDDVWEYREDEWKTLLAPFR

KGGTQGNIVIVTTRRPGVAKEIDSTNCSIKLDRLDHEDSMRLFQACVFDNNKTWEDYPSGLQKVGVDIVKRLKGF

PLAIKTVGRLLRNKLTLDRWTRVYESKEWELQSNDDDIMPALKLSYNYLPFHLQQCFSYCALFPEDYRFCGQELI

NLWIGLGLLGTDDQNKTMEYLGLEYLDQLVDNGFFEQVGKEHDSPYVMHDLLHELATNISSHEIRCLNSSTLSSI

NEIPKSIRHMSIIVDNRHVENRIAFENHKKDLSTLGNKLKAGNLRTIMLFGEYHGCFYKIFGDVLIDAKSLRVIF

LSGASYDVGDVLCNFSELVHLRYLRIEDSGMCGASLPNSITRFYHLLVLDLQEHYGELGFPRDMGNLLKLRHFLV

HDDNIHSSIFEVGKLNFLHELRKFEVKREMKGFDLEQIGRLLVLRGSLGIYNLEKVEGIKEANDAKLAYLNHLDS

LVLDWDNERCNRDPIREGNVLENLKPHDNIRELHIAGHGGVSCPNWLSGDLSIRNLESLLIKYVNWDTFPLPGKL

YMTEGQERQGSVTSHDFHNLKRLELVNIQKLKRWHGDGTINLLPHLQSLTISDCPELTELPLSDSTSCQFQQSTI

CFPKLQEIKISECPKLLSFPPIPWTNSLLYVSIEGVDSGLEMLNYSKDESSLYITGKDAPDSMFWNVLDFNNLTE

LQLLGIQKCPPISLDHLKMLTCLKTLQITDSGSILLPVDCENEVKYNLLVENLEINSYGASGRELTQVLSHFPKL

SNLLIRKCQNVARLGVAEQRTITTPESSLSPSANKAAKTLTTILQQQTGEAEEMETATADDGLLLLPPQIKVFEI

SECRELSLDSGGIQGLLSLQTLGIYDCPKLLCSSSSSYSPFPTSLQTLDLSKVEGMETLPSPLPNLTSLSITSCG

NLRGGEVLWDLLAQGNLTSLYVHKTPNFFLGLEQSCSQVDKQEDVHRSWRLQELWTDDFARVLATPVCHLLSSSL

TKLVLSCNDEVECFTKEQEKALHILTSIEDLEFYCCEKLQSLPAELSQIPTIKTLWISCCPAISSLGNLPNSLQR

LGISCCPAISSLGNLPNSLQQLKIDDCPSISSLDGTTIRSLPKDRLPTTLREIDVRYCRNEELKRQCRKLQGTIP

IVKA

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	233	539	1.1e-73
NB-ARC [Pfam ls]	233	539	3e-74
LRR [Pfam ls]	945	969	5.2
LRR [Pfam ls]	1377	1400	6.3
LRR [Pfam ls]	1443	1467	3.1

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	695	716	4.2
LRR [sensitive, ls]	695	716	95
LRR [sensitive, ls]	945	969	0.23
LRR [sensitive, ls]	945	969	5.2
LRR [sensitive, ls]	979	1002	2.2
LRR [sensitive, ls]	979	1002	50
LRR [sensitive, ls]	1202	1223	2.7
LRR [sensitive, ls]	1202	1223	61
LRR [sensitive, ls]	1244	1267	0.61
LRR [sensitive, ls]	1244	1267	14
LRR [sensitive, ls]	1377	1400	0.28
LRR [sensitive, ls]	1377	1400	6.3
LRR [sensitive, ls]	1401	1427	1.1
LRR [sensitive, ls]	1401	1427	25
LRR [sensitive, ls]	1443	1467	0.14
LRR [sensitive, ls]	1443	1467	3.1

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Xa1 [Oryza sativa]	9	1460	1e-128
I2 [L. esculentum]	192	1458	1e-104
Mla1 [Hordeum vulgare].	198	830	8e-34
Pib [Oryza sativa].	247	747	9e-30
L6 [L. usitatissimum]	249	513	1e-10
M [L. usitatissimum]	249	1133	2e-18
N [N. glutinosa]	272	612	7e-13
Pi-ta [Oryza sativa]	274	725	2e-23
RPM1 [A. thaliana]	276	704	4e-29
RPS2 [A. thaliana]	276	996	1e-29
I2 [L. esculentum]	997	1483	1e-12
Xa1 [Oryza sativa]	1043	1431	8e-14

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 6269.m00141

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)