Report for 6277.m00143

 > 6277.m00143, length: 640, copies: 1 

MATILDSLVGSCANKLKEIITEEVILILGIQEELAELQRKTELIHCCISDAEERRMEESAVDNWLGQLREVLYDV

DDIIDLARFKGSILLTDHPSSSSRKSIACTGLSISTCFSNVQARHEVAVKIRSLNRKIENISKDRVFLTLKSTVP

TGSSSVLRVRKSSHLLEPNIVGKEIIHACRKMVDLVLEHKGRKLYKLAIVGTGGVGKTTLAQKIYNDRKIKGSFN

KKAWVCVSKVYSEASLLRELLRIMEVHHDQDESIGELQSKLEIAIKETSFFLELDDMWQSDAWTNLLRIPLHAAE

MGAILITTRNNIVALEIGVDHTYRVDLMSTDVGWELLWKSMNISESIELQTLQDVGIEIVRKCGCLPLAIKVIAR

VLASKEQTENEWKKILSKNAWFMNNLPNDLRGALYLSYDELPHHLKQCFLYCSVYPEDANIYRDDLTRMWIAEGF

IEDHGGQLLEETADEYYYELIHRNLLQPDGLYYDHSSCKMHDLLRQLACYLSREECFVGNPESLVGNTVSKLRRV

SVVTDKNMVMLPSMDEVQYKVRTWKTSYEKTLRVDNSFFKRFPYLRVVDWTDSFVPSIPGCIGNLIHLRLSTIGH

SDNVWMPKLFGRFGCLMQAHYQHINLLIEQESMNGSMGRW

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	155	456	2.2e-60
NB-ARC [Pfam fs]	197	456	2.7e-64

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	5	594	3e-49
RPM1 [A. thaliana]	15	623	2e-46
I2 [L. esculentum]	34	593	8e-52
Pi-ta [Oryza sativa]	58	527	4e-35
Xa1 [Oryza sativa]	121	594	3e-39
Pib [Oryza sativa].	155	508	3e-32
RPS2 [A. thaliana]	182	627	4e-30

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 6277.m00143

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)