Report for 6278.m00154

 > 6278.m00154, length: 1023, copies: 1 

MEAPTCGLWGAVLNLPGRLDGVLLRHGSILPKGAEEEIPLIKRDLHLMISILNGYYSESPELEDATATTVARRRC

WTKEVRELSYDIEDCIDHYEHAATAGSAGGRTASGGIPPRRKITRRRWQRTTPLWIPERLKQRLWMANKIREFSL

RAQDALKRHAMFCSSVGGNGIATSTASSSTAATGDASSSSSTICWHTTRFRERDFCVPHVGINVAMNKLEDWLTA

CDDEDQKRLRVVSIVGVGGIGKTTLANELYRKLRRQFECWAFVRSSQKPDVRRILISILSQLRLQQPPESWKVHS

LISSIRAHLQDKRYLIIVDDICFISTWDIIKCALPDGTSSSRVLTTTQYDDLAVQSCGYDTKYVFKMKSLSQHDS

RYLFFNTVSGSRFIYSPGSTEVSDDIIRKCGSLPLAIVSITSILEKSRKMEQWGYVNKSLGYNLMKNPTLEGIKQ

VLDLSYNNLSEHLKPCVLYLSIYQEDYLICKDDLVNQWLAEGLICATKDHTKEEISEACFGELVSSKMIQPVHID

GNGDVMSFVIQHMVLNFISYKSIEENFVTVIHHSQTATKLSDKVRRLSLHFGNVKDAKLPINMRLSQVRTLAFFG

AYKYWWRSIKDQFPLLQVLILHFWHDEDIISFDLTIISQLFRLKYLKITSDVTLELQTKTRGLQCLETLKIDARI

STAPLDTTHLSGLLHLSLPADTNLANGIGHMTSLHTFGYFDLSYNSVENVLSLGKLTNLRNLQLTCSTIRPNSLE

IKLQCLGFILQKLSNLKSVTMSTAGSSCVNSTDASSANVSVRISGDGLSSMSSPPALVERLELLPRICIFSYLPK

WISLLSKLRILKIGVRELVRNDIDVLMGLRALTDLSLHVHTKPTEIIFFGGIGFKALKYLKINCCVAWLKFDMGA

MHSLYKLKLGYNVDGVDQESTIPVGIQYLYGLKEISVKIGGADPEKYDRRAEELAFMIDSGLHDRCMSITLQCVR

QMFDFNEDKSSLTHEEQRKLKQQEILEDDSDEEYDEIIQDSGEQEVKQ

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	189	499	8.7e-40
NB-ARC [Pfam ls]	189	499	4.9e-39

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	10	942	1e-62
Pi-ta [Oryza sativa]	14	745	1e-134
RPM1 [A. thaliana]	23	935	2e-43
Pib [Oryza sativa].	51	389	5e-11
RPS2 [A. thaliana]	210	540	2e-17
Pib [Oryza sativa].	228	667	2e-37
I2 [L. esculentum]	232	693	1e-31
Xa1 [Oryza sativa]	234	739	1e-29
Pi-ta [Oryza sativa]	811	955	5e-20

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 6278.m00154

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)