Report for 6310.m00164

 > 6310.m00164, length: 792, copies: 1 

MEEKRLTIFIVDLEAQGYRGWRIWRRYLTGCTTQISVRHDLSGQIKRIKSRLDQISENHKEFKIEHTPGAWTSSI

TEVAAWDNIGDAPVGFDGYLRALENHLLSHEHTPQQRFISILGETGIGKSTLMLTICNKIIKDHENHFDKLIWYN

MPPNSSANDLLKQVYERAPDKVPSEGEDTDITKKLRSFLHDKRYLVILGGINSITVLNCVKASLPDNRNGSRVVL

ILEPESQEVAKHADTLNKKVDADSKNISGSTIQLGRLNESQSAELFCRRVYGYNYTKPRGYKVSYNEQVFKITGG

HPLAIVVLAGLLRSKEMPVEWDSVLQQLMPGVEAGESQGNKIAGVLLTKEKPFEWDALLQQLMPTTEAKLSNRMT

IERIFSTSFDDLPHDLKSCFLYFAAYPTNITHPADQIMRMWIAEGFIKPEKGKNMEDLAQEYLKELISRFLVEVK

YRNECEKIELVQVHNRLLRFLQSEAREASFIEIHDNTDVLAPAAVRRLSIQNDSGNYIPFGNRFPKLRSFICRVE

EGEGASATPDLKNDPKNIPRKDPLKFLCGSKFLRVISIGGIHLAELPDAIGDMIHLRYIGVTSCDLENLPSSIGR

LLNLQTLDIRNSKVKIIAPKFWRIKTLRHVIAAQLQLPNSVGELNNLQTLHGVKPAENWGGLTCPLDMMTNLQSL

ELHGFNDANHGVALERALQKLELLGHLKLTGDKIPSSVFTAPSLRYVESLVLDGDIKWADNSSNTSNYSPEVALG

ICELRPNLTVLKLNSVSKELEEFIEKIRPHLTVYECPTRTDA

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	69	427	8.4e-15
NB-ARC [Pfam fs]	89	225	1.3e-08
NB-ARC [Pfam fs]	292	328	2.9e-06
NB-ARC [Pfam fs]	342	427	5.6e-19
LRR [Pfam ls]	603	625	5.2

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	580	602	1.1
LRR [sensitive, ls]	580	602	12
LRR [sensitive, ls]	603	625	0.48
LRR [sensitive, ls]	603	625	5.2

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
RPM1 [A. thaliana]	17	757	5e-41
RPS2 [A. thaliana]	22	620	1e-16
Pi-ta [Oryza sativa]	89	651	5e-27
Pib [Oryza sativa].	101	634	2e-22
I2 [L. esculentum]	114	652	5e-23
Mla1 [Hordeum vulgare].	114	650	3e-28
Xa1 [Oryza sativa]	114	780	1e-14

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 6310.m00164

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)