Report for 6325.m00169

 > 6325.m00169, length: 1415, copies: 1 

MDVVGAASWLVQVVLEKLVGDGIDAAWAAARAGGDPGRAHGGDVRRLGSRLQSLHALLSEAQEHAPMARRRSEAL

LRSLRSLESLATDADNLLDEMLYHQIHRRLHPDEPSTSSNSCSSLFAVQLVEPNNRVAKRVRHSGDGDTTGRIKD

ILERMCEAGDDVREAIKMEKLDVSAAGGGQDDRIIQRRPTTSYSTEPKVFGRDTVKDRIVVMLISSETCGADLAV

LPIVGNGGVGKTTLAQLVYSDTRVQAQFSKRIWISVSVDFDEVRLTRELLDCVSNGVNKHGGITNLNKLQEILEE

DLKSERLLLVLDDMWEDNDKSRWNKLLAPLRCSSLRGNAILVTTRNHSVVKMIATMDPIHLDGLEDGDFWLLFKA

CAFGDEKYEGHPSLQVIGKCIANKLKGYPLAAKSVGALLNRDLDGGHWMSILQSDEWKLQRGPDDIIPALMLSYI

HLPFHLQRCFSYCALFPKGHRFDGLDLVRVWISQGFVSSNNKKMEDIGHQYLNDLVDCGFFQRSTYYSMHDLIHD

LAHIVSADECHMIDGFNSSGIAQSTIQHLSINTRYAYKWDVYSQKFYSKDDFQRKLTYVGETVQTRNLSTLMLFG

KYDADFSETFSHIFKEVQYLRVLRLPTLTYSIDYLLSNFSKLIHLRYLELISSGPGGPLPEVICQLYHLQVLDVE

YWVHLSTLPRAMNDLVNLRHFVARGELHALIAGVGRLKFLQELKEFRVGKTTDFQIGQLNGLRELGGSLAIYNLE

NICSKEESKNAGLRDKIYLKDLLLSWCSNRFEVSSVIEEEVLESLQPHSGLKCLSINGYGGISCPTWLSSINPLI

SLETICLDSCTKWEVLPPLGQFPLLRTLHLIQLPSSRVVPTVSSDDWTGSEKHIIFPCLEELVIRDCPELRTLGL

SPCSFETEGSHTFGRLHHATIYNCPQLMNLPQFGQTKYLSTISIEGVGSFPYIRLFVRALYIKGCASPSKLDQIL

MLIEGNLCLLEKLTIESCLDLTYLPWKTLSKLVSLEMLVIVDCPRLSLTLYPYNQDGGNFSFMSLLNKLVIRACS

ITGKQLSHLILQLPFLHYLTIGKCPKITSLLLGDVINGSDSSSTSDYLQLTTDGMLQIPSHLLIQLQYLSIDDFP

DLVLLWKEGFHGFTSLRTLHITGCTQLLSPMITENKRSNKNSSLLPPLLHDLMVTHVHNELLPFLLSNLTSLSIF

AISNSPELTSLVLHSCTSLETLIIEKCVGLSALEGLHSLPKLKHLRIFQCPSLAKTWGPSSVDRPGFSLYLDKLE

IDTTVLFNTEVCKKLPSLRHLVFFMLSIKACPGIKSLPENGLPASLHELYVSSCSAELKEQCKKTKNVRCVYVDR

NASKFIVICKLLRLYFRITKLGAWQRSLWLQSRTGGSNELMVLTKVLFTIATTVVFRTGLVISEL

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	183	492	6.2e-56
NB-ARC [Pfam ls]	183	492	6.1e-56

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Pi-ta [Oryza sativa]	42	675	1e-24
I2 [L. esculentum]	44	1329	1e-111
Pib [Oryza sativa].	188	698	1e-28
Xa1 [Oryza sativa]	190	1337	1e-156
RPM1 [A. thaliana]	193	703	3e-32
Mla1 [Hordeum vulgare].	193	773	7e-24
RPS2 [A. thaliana]	199	931	6e-26
Xa1 [Oryza sativa]	711	1346	4e-12
Xa1 [Oryza sativa]	742	1338	4e-24

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 6325.m00169

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)