Report for 6331.m00141

 > 6331.m00141, length: 957, copies: 1 

MAHTMVSVATGVLCPVIGKLSTLLQMKYNRLKGVDSEILSLKDELSSMNALLLKLEDIDDLDIQVKEWRDQIREL

SYDIEDRIDYFMFQVDGDAHRRESMKGFLQKSIRQLRMLRARDKMADQIIKLKARVDMASERRKRYNFDETLSSS

IGVVPIDPRLPALYVEEENLVGIDTPRVELIRFLTEGDDKLLQKLQVVSIVGIGGLGKTTLARQVYGKISGQFDC

QAFVSVSQKPDIRKIFKNILINITELDYGAIDAWDEERLINKLREFLNDKRYFVVIDDIWSTTVWTTIRCAFCEN

YRGSKILCTTRIISVAETCCSADCKNIYEMKPLSDVYAEKLFIKRIFGSEDQCPAYLKDIYIDILRRCGGLPLAI

ISLASLLATKPRTKEQWGRYRNSVCSATENVPSVSNMQRILSLSYNDLPHYLKTCLLYLSTFPEDVLILWDPLVR

RWIAEGFVTAQGEGGRTLEEVGECYFNELINRSMIQPDEIQYDGQAHACRMHDMILDLIISKSVVENFITSFSHN

YLLGCQDKVIRRLSLDCRERDAILPATMVLSSARSLVVYGSTEHIPLISAFHVLRTIAIESNDKLKNCYLRDIGR

LFQLKCLRLREVGISELPEEIGELQELQTLELQRTRIKELPKSIVRLKNLVFLVADGITLPEGIGNMRALQKLIG

VKVDISIPVDCLRELGGLNDLRCLYIIWCVSDAYPDKKTYTDSFVSCIDELCTFKLRYLQLGCDDSSLDFMLDSW

SHPPYPLYNFQMITYYCFPIIPEWMATLFNVAFLDINVTSVGKDVLRILGDLPSLLSLSITTKTIVSERLVFGSN

GFQCLKEFDFHSWQDVLGPLLFEVGAMPKLEKFRFNVWARTLGSLDSNFYEGLQNMACLKNLVIEVDCREARAEQ

VEATEVAAKNAIANNHLPDHLNVQMRRTNVDRMIKDTVMGNSVVEQQEETAVKIHYN

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	155	463	1.2e-57
NB-ARC [Pfam ls]	155	463	1e-57

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	6	677	1e-41
Mla1 [Hordeum vulgare].	6	926	1e-134
RPM1 [A. thaliana]	17	887	2e-65
Pi-ta [Oryza sativa]	32	702	9e-85
Pib [Oryza sativa].	48	334	8e-15
RPS2 [A. thaliana]	126	645	5e-22
L6 [L. usitatissimum]	163	382	1e-14
M [L. usitatissimum]	165	382	1e-12
Pib [Oryza sativa].	166	655	1e-57
Xa1 [Oryza sativa]	195	673	4e-25

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	55	76

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 6331.m00141

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)