Report for 6372.m00151

 > 6372.m00151, length: 913, copies: 1 

MAEAAVVLALGKLVTSFGVSSLRTYLEKEPARLPDLPYTAKHIERELDMIHHFLSQVGTKIYSNKVLEGWIVRVR

KVAYRVEDITDEYSYNIALEHENHFKRLIHKFFYPTAFHRIAIELKDIEEEIKHLSQLKRDYREMFNELLDNTSD

SAHIHLLSSNGSPHAVKGDDIVGMKEDMELLGRWLDPKELDRTVISIWGFGGLGKTTLVRKVYDWEKGMKSFDCY

SWIAVSHNYNINAILRQLIQELSEDQSKIPTDLDTMPHGKLNDELKEVLSNKKYLIVLDDVWDTRAFHELSDSLM

DDKKGSRIIITTRNNDVASLAQEMYKMKLNPLGNDDAFELFHRRCFQKSNMECPSHLEELSRQIVNKCGGLPLAI

NAIGNVLAVQESKEIVWRRINNQFKCELEDNPGLDKVRSALSISFMYLPRHLKNCFLYCSMFPQDYIFKRELLIK

LWIVEGFVIQRGQSTLEEVADGYFTELIQQSMMQLVENDEIGRVVSCRMHDIMRELALSFSRKERFGLADINLET

QKKDDVRRLLVSNFDQVNQLIKSSMDLPRLRTFIAANRVANYQLLTLLISRCKYLAVLELRDSPLDKIPENIGDL

FNLRYLGLRRTRIKSLPISIKKLTNLETLDLKSTNIERLPREVAKLKKLRHIFAEQLYDPEERQLRYFRGVKLPD

CAFDLAQLQTLQTVEATKESVKLLKYLPELRLLCVENVCRADCATLFSSLSNMNHLYDLVISANDLNEPLDFNAF

NPICTKLEKLTIRGCWDNETFRRPVFCEYGANIKYLTLTFCKNDTNPLPSISSSVPNLIFLSIRRGCWAEDIILR

AGWFPQLRTLWLGKLEELRRLVIEEGAIIRLEVLLLLSLPSLREVPKGLELLASLKKLNVTMQHHELKVEWERDN

WKTKLHRIQEIRF

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	159	463	2e-79
NB-ARC [Pfam fs]	169	463	6.8e-79
LRR [Pfam ls]	602	624	0.64
LRR [Pfam ls]	625	647	0.35

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	579	601	1.1
LRR [sensitive, ls]	579	601	23
LRR [sensitive, ls]	602	624	0.031
LRR [sensitive, ls]	602	624	0.64
LRR [sensitive, ls]	625	647	0.017
LRR [sensitive, ls]	625	647	0.35
LRR [sensitive, ls]	730	751	6.5
LRR [sensitive, ls]	730	751	130

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
RPM1 [A. thaliana]	10	911	1e-106
I2 [L. esculentum]	41	814	2e-58
Pib [Oryza sativa].	49	342	8e-18
Mla1 [Hordeum vulgare].	70	739	2e-63
Pi-ta [Oryza sativa]	70	630	6e-47
RPP5 [A. thaliana]	143	886	2e-11
M [L. usitatissimum]	144	514	8e-21
L6 [L. usitatissimum]	169	514	2e-19
N [N. glutinosa]	170	909	8e-17
RPS2 [A. thaliana]	171	871	8e-44
Pib [Oryza sativa].	172	659	3e-58
Xa1 [Oryza sativa]	193	877	8e-40

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	118	144

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 6372.m00151

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)