Report for 6379.m00248

 > 6379.m00248, length: 1321, copies: 2 

MPSSSPPLADDRAPMDRRMAQLGSTSGTGLPLQPPTPPSTAPPSTGGDELPALLLRRRSSPTTSPVLPAAGTILR

RLTGRSPLGRSLCGFGSSASRAAYDISDMLDEFQSTEPDAGKKKGVFHKLATAPSRFPMASKMKRMRKELAKNTE

EHKNFSFVPNTASFEQHRADPRPQLPELTDESVIIGRSEDKRNIIAALLTRGSEEKKESFISDIQLMRKRLAGLL

EGRRILIVLDNIWESDQFKLDNLKIMLNVGKKGSEVDVIVTTRTEEIAKRICTVKPYKLEPLNDDICWAIIKIYS

AFEGRGDKQQVEVIGQEIATKCGDSHGHRTLEGLARPKSPDYKQTGPQTRTNTSPQPPKRSTAGSGDGQKKGGAP

RSEGVVAGMKRNRELKTGATKTTVSSMNPARNSGHHGTNPTTAATTTNFTASAESTLGRADEQLRRSDGEGKGGR

DVRGGLRRCRRREGGRRPDSPTTEGRPPISQKDDRLVTLTMHDPVHDMARSVIDDELIVLDDTKENKCGQSTYRY

VFITNYDKPSKEFSMILHGKIRALHLVGCSKTKLNDGAFSSAKCLRVLDLNHCSIQKLPDSIYQLKQLQYLHAPQ

VRDGVIPESISMLSKLNYLNLRESPKISKLPESIGKLEALTYLNLSGCSHLVEFPESFGELRNLEHLDLSGCSRL

VELPETVGKLDALMYLNLSGSRIVELPESFRELKNLVHLDLSNCTHLTDVSEHLGSLNRLYRPRLYSRCLVAYPR

RRKIQELSSVQKENEASHIHMQNVMDAISRLVYSDSGYSARGILSEALGSLTELKYLNLSGCLLMVVLPGSFGNL

ENLVHLDLSGCSCLEWTPDNLVGLTKLQHLNLSHYCTGTPRSSMPSQGAARYFDRSYRTAFWKPQEATYPEPLEL

LPSKEPTRKFMRDRLPQAPICDRLPGTGVSQDKSPSQLHQNSFLDDGNGLLLRPVLLGTQPKLYQNLVLLPNFVV

HDANPAELQISCLENVQSTGEVKRIKLSQKTSISKLALEWRRDAKRFADDMNVLEQLVPPNTLSQFELRGYNNVC

LPRWLTCISSYLPDLVRIVLDDIPSCSSLPPLGVHVPKLQELEILDCPKLKLKLYEPRAFQWKISNSDNIVTSCG

GGQYTGPSSSSSSTTLDVQHCKVPLDQWTLLCHLPALHELRIYECDDLTCSSPEIIESLSSIKQITVECQDMVEL

PASLCQFKSLPKLILWKCLKLKSLPESTKHLTSLKSLWMVGCSSMTSLPEGLGHLASLMELNINDCPHLKSLPES

IQLLPMLEVVKVSYCPELKRWYEIEENKMKLAHIGKKCFIAPSLHC

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	216	323	6e-11
LRR [Pfam ls]	569	591	0.0086
LRR [Pfam ls]	615	638	3
LRR [Pfam ls]	639	662	0.072
LRR [Pfam ls]	663	686	0.056
LRR [Pfam ls]	687	709	0.47
LRR [Pfam ls]	710	733	0.031
LRR [Pfam ls]	803	826	0.055
LRR [Pfam ls]	827	850	3
LRR [Pfam ls]	1257	1280	2.9

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	569	591	0.00032
LRR [sensitive, ls]	569	591	0.0086
LRR [sensitive, ls]	615	638	0.11
LRR [sensitive, ls]	615	638	3
LRR [sensitive, ls]	639	662	0.0026
LRR [sensitive, ls]	639	662	0.072
LRR [sensitive, ls]	663	686	0.0021
LRR [sensitive, ls]	663	686	0.056
LRR [sensitive, ls]	687	709	0.017
LRR [sensitive, ls]	687	709	0.47
LRR [sensitive, ls]	710	733	0.0011
LRR [sensitive, ls]	710	733	0.031
LRR [sensitive, ls]	803	826	0.002
LRR [sensitive, ls]	803	826	0.055
LRR [sensitive, ls]	827	850	0.11
LRR [sensitive, ls]	827	850	3
LRR [sensitive, ls]	1161	1185	0.67
LRR [sensitive, ls]	1161	1185	18
LRR [sensitive, ls]	1209	1232	1.5
LRR [sensitive, ls]	1209	1232	41
LRR [sensitive, ls]	1233	1256	0.37
LRR [sensitive, ls]	1233	1256	10
LRR [sensitive, ls]	1257	1280	0.11
LRR [sensitive, ls]	1257	1280	2.9

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
N [N. glutinosa]	533	736	6e-11
Xa21 [O. sativa]	545	863	2e-12
RPP5 [A. thaliana]	546	843	6e-14
FLS2 [A.thaliana]	563	882	1e-12
FLS2 [A.thaliana]	565	881	3e-14
N [N. glutinosa]	568	844	2e-13
FLS2 [A.thaliana]	582	857	9e-11
RPP5 [A. thaliana]	621	858	3e-14

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 6379.m00248

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)