Report for 6380.m00155

 > 6380.m00155, length: 2732, copies: 1 

MGGGGGALLSTNKFDGKGGGRLPMAHAATMVALLFSTPCIVSLSPSLPPVALLSTVARHGLLSGTGHRELGVRSA

AATVAAAQAQQAPKTDPAEGKCPLLRLNFYAVAALNTILGRWGKKASSEWNISGEPCSGYAIDKTDWDYYPNINP

FIKCDCTDSNNTVCHITKLRVTKLDVVGQIPTELQNLTHLVDLYGYILGYKEYFLRFTMNFNYNYLTGAIPSFIG

IFTSMKYLALAMNPLSGPLPKELGNLTNLVSLGISLDNFTGGLPEELGNLTKLRQLRASDNGFIGKIPDYLGSMT

NLQDIAFQGNSFEGPIPQSLSNLTKLTSLLVTDFWKTRMSRRIGDIVDGNSSLAFIGNMTSLSELLLRNCKISGD

LRAIDFSKFEKLILLDLSFNKITGQVPQSILNLGNLQFLFLGNNSLTGMLPDGISSSLKAIVYRDFSYNQLSGSF

PSWANQNNLQLTIHFHLFESGFMPSYNCWTSHGEQGVEMEEDEVEDDNIPDFAQHVGFEGNQTGEEEIAADGNDV

ADDLGQMLQDAREDCESEKEAHKLDKMLEDHRTSLYPGCEQGHKKLDTTLELLQWKAKNGVSDKAFGDLLKLVKN

ILPGGNKLPETTYEAKKIVCPLGLEVHKIHACPNDCILYRGEEYENLEACPVCKALRYKIRRDDPGEVDGQLTKK

RIPAKVMWYFPIIPRLRRLFRNKGNARMLRWHAEERQQDGMLRHPADGSQWRNIDRKFKEFGKDARNIRFGLSTD

GMNPFGEMSSGHSTWPVTMCIYNLPPWLCMKRKYIMMPIIIQGPKQPGNDIDVYLRPLVEDLKQLWKKEGVPVWD

EDKQEEFNLRALLFVTINDWPALSNLSGQSNKGYKACTHCMDETESTYLKHCRKVVYMGHRRFLAANHPVRKKGK

HFEHKADHRTKPKHRSGKTVFAMVKDLKVVFRKGPGSQHIESEDGHAAMWKKNSIFWELPYWEFLDVRHAIDVMH

LTKNLCVNLLGFLGVYGKSKDTLEARNDLKHMEQRGDLHPEPKEKGSHYLSPASYTLSKAEKECMFECLGSIKVP

SGYSTNIKRIISTKEKKFTNLKSHDCHVLMTQLLPVVIRGILPDNVRATITKLCAFMNAISQKMADRDEEQILYD

TIAEGSSQYWNEEEGNEDPNQYLNEEGNVERDAEGNQQGHVERDVEGNQEEEASGSQPSVGQKRARGQRGAAKKL

EGRHIITEVEEDGRPSAPAEAAKNYVRHSGWVVRDNVPVSTVYWRRTRARGDHESFVPDSEKEMLWTTMLETFTL

PAGTEDKVKRWTLKKMAEQFQSFKGDLYQKYILKGQTPNFDTFPKLRDHWDEFVAYKTGEQGQAMMERNKENTAK

KKYHHHLGSGGYSVAMPKWEQMEASLIERGIEPAIANWPERSKFWYYAHGGTLNPADGSLVFGYQIQEAARRLTD

AVEASSQGTFRPDRDRDELTLALQTPEHPGRTRGKGVIPWKIGFKEDIHTYRSQMRSKRDTEAKIADLEFRVSSY

ELNMQEEVARKVDERMAAHRSHDPQPTIPPAMVSPSGNRSSCASTGQVGSQSMDAMQTQDESTCPVDDITQRTPC

ELHIPFKNLSIKVASGMAIPTDPSGTYHCRPIPAGYSKVEVELVEGAYEDLELDYPGGDGETHLRDTSHAIILWR

RRYIILPGRQAASRAPSPPAPPSPPQDPAPSPPHAPPAPSPPQAPASTPPQDPAPTPPRAPTPTPPQAPLPAPSK

SRAPPAPPPAHTRATKKAKVDAAKNKDPGYDCTQEELDAYVASEVKRQFKPRSPEKKIPIDPSVRNFFRGMSASV

KEAIKLSDYERTLKKASSGKSKPVPQLGEQPKQEIEPLVTGKEMTIEQFITDTGLTTDQLLGVAPIEKAEVKYMY

ELGKPLVKPELLQSLPTQMYKFHQLYMEMSAAGREMIGARIRDTDFLQGDDILWINFKGIYELYQLDALDVSIMS

CWILMEIQRARRRRVFDTGFIDPRRVNVAMLDQYPQETEDNLVHLLKAQHYKAFILLPYNTEFHWVLLLFDLEAC

TVNVYDSMDKKESTFDKVFELIDRAWYRFRHLVRGKWRERLRRKFKFPCAKQKQGNNLCGYYVCEYCHCLANQII

TTRELDFIRMRDNLATHKEFITAVQEQLMGFINEEILNPKDYSFAIDCGSKTALRGSDNTIYEADSINLGAASYY

VTDLTRWGVSSVGNYFQATDGNNIISSPQHFQNVVDSELFETARMSPSSLRYYGLGLENGNYTVVLQFAEFAFPD

SQTWLSLGRRVFDIYVQISLLLCEMAYQKGNVKQGKLPDGRVIAVKQLSQSSHQGTNQFVTEVATISAVQHRNLV

RLHGCCIDSKTPLLVYEYLENGSLDRAIFGQNSFNLDWATRFEIILGIARGLTYLHEESSVRIVHRDIKASNILL

DIDLTPKISDFGLAKLYDENQTHVSTGIAGTIGYLAPEYAMRGRLTEKADVFAFGVVWGLYEKDQALRIVEPSLK

DFDKDEVFRVICVALLCTQGSPHQRPPMSKVVAMLTGDVDVVKKLVFVLLPDDAGGRVNGEDVLKEVGGDDAEQL

REDDAVHLDPINAVEVEGVGEDVIRQRVLAEGNQEQAMPLSVVGGGNVERDGDLGLDVEDADCLGMEGSYAVGES

RRGEEGGEGWRMSRRLGKISGGHRGLEYGDRRGRGAGGGGQCSRRQEEPTEDGGESHGAPSEARVAVESETVFVV

VGTISRPGGIVMVARTASATASAVELIAAKVD

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	277	300	3.5
LRR [Pfam ls]	301	324	1.9
LRR [Pfam ls]	386	409	0.81
LRR [Pfam ls]	410	434	0.072
Ser/Thr pkinase [Pfam ls]	2277	2544	4.6e-31
Ser/Thr pkinase [Pfam fs]	2280	2457	6.2e-43

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	165	188	2.6
LRR [sensitive, ls]	165	188	70
LRR [sensitive, ls]	229	252	3.2
LRR [sensitive, ls]	229	252	86
LRR [sensitive, ls]	253	276	0.73
LRR [sensitive, ls]	253	276	20
LRR [sensitive, ls]	277	300	0.13
LRR [sensitive, ls]	277	300	3.5
LRR [sensitive, ls]	301	324	0.071
LRR [sensitive, ls]	301	324	1.9
LRR [sensitive, ls]	361	385	0.36
LRR [sensitive, ls]	361	385	9.9
LRR [sensitive, ls]	386	409	0.03
LRR [sensitive, ls]	386	409	0.81
LRR [sensitive, ls]	410	434	0.0026
LRR [sensitive, ls]	410	434	0.072

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Cf-9 [L. pimpinellifolium]	152	466	4e-20
Xa21 [O. sativa]	160	427	1e-13
Cf-9 [L. pimpinellifolium]	165	457	1e-20
Cf-9 [L. pimpinellifolium]	165	428	7e-15
FLS2 [A.thaliana]	165	475	8e-30
FLS2 [A.thaliana]	165	472	8e-25
FLS2 [A.thaliana]	166	451	4e-28
CLV2 [A. thaliana]	169	427	4e-13
CLV2 [A. thaliana]	177	453	4e-21
CLV2 [A. thaliana]	178	448	3e-16
FLS2 [A.thaliana]	178	435	2e-22
Xa21 [O. sativa]	178	475	2e-27
Xa21 [O. sativa]	195	429	9e-23
FLS2 [A.thaliana]	207	311	8e-12
Xa21 [O. sativa]	208	426	2e-21
FLS2 [A.thaliana]	216	475	1e-17
Xa21 [O. sativa]	218	451	1e-23
CLV2 [A. thaliana]	228	451	3e-15
CLV2 [A. thaliana]	233	444	9e-13
FLS2 [A.thaliana]	233	452	2e-17
FLS2 [A.thaliana]	253	475	3e-13
Pto [L. esculentum]	2280	2507	1e-39
Rpg1 [Hordeum vulgare]	2280	2519	1e-29
Rpg1 [Hordeum vulgare]	2280	2518	2e-22
FLS2 [A.thaliana]	2282	2510	5e-30

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value
Transposase family tnp2	702	928	4.2e-165
Ulp1 protease family, C-terminal catal	1914	2120	0.00015

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	1484	1507

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 6380.m00155

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)