Report for 6420.m00138

 > 6420.m00138, length: 206, copies: 1 

MRRCSCWQLLWLVLVCSWRIAAAQAQAAPRTDPTEAAALNTILGRWGKKASSEWNISGELCSGLASDKTNWDDYP

NINPFIKCDCSYNNNSVCHIIKLRVYKLNVVGQLPSELQNFTYMEDLNLAFNPLSGQLPKEIGNLTNLLMLGVSF

NNFTGELPEELGNLVKLEQLRAQDNDFTGKIPDNFGSMSSLEDIVYYAVTDGNCAI

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	118	141	4.7
LRR [Pfam ls]	142	165	2.3
LRR [Pfam ls]	166	189	0.69

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	94	117	2.4
LRR [sensitive, ls]	94	117	66
LRR [sensitive, ls]	118	141	0.17
LRR [sensitive, ls]	118	141	4.7
LRR [sensitive, ls]	142	165	0.084
LRR [sensitive, ls]	142	165	2.3
LRR [sensitive, ls]	166	189	0.025
LRR [sensitive, ls]	166	189	0.69

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Xa21 [O. sativa]	89	194	1e-10
FLS2 [A.thaliana]	95	191	1e-10
Xa21 [O. sativa]	95	194	6e-14
FLS2 [A.thaliana]	98	194	1e-10
FLS2 [A.thaliana]	104	197	8e-12
FLS2 [A.thaliana]	104	184	3e-11
FLS2 [A.thaliana]	104	192	7e-11
Xa21 [O. sativa]	104	195	4e-11
FLS2 [A.thaliana]	107	194	2e-11
FLS2 [A.thaliana]	107	198	3e-11
Xa21 [O. sativa]	107	191	1e-11

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 6420.m00138

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)