Report for 6422.m00150

 > 6422.m00150, length: 1476, copies: 1 

MAELLSALLPALLKKAGESISTEFAFIGGIERKCSELKTSLLAINQVIYDAEEQASKKPAVKSWIAKLKMAACEA

DDALDELHYEALRSEALRRGHKINSGVRAFFTSHYNPLLFKYRIGKRLQQIVEKIDKLVLQMNRFGFLNCPMPVD

ERMQTYSYVDEQEVIGRQKERDEIIHMLLSAKSDKLLILPIVGIGGLGKTTLAQLVFNDVKVKAHFQKHMWVCVS

ENFSVPDIVKGIIDTAIGNDCGLKSDNLELLQQRLREELSQKRYLLVLDDVWNEDEQKWEALRTLLCSCKMGSAV

VVTTRNSNVASVMGTVPPLALEQLSQEDSWTLFCERAFRTGVAKSCEFVEIGTKIVQKCSGVPLAINSMGGLLSR

KHSVRDWLAILQNNTWEENNILTVLSLSYKHLPSFMKQCFAFCAVFPKDYEIDKDDLIHLWISNGFIPSKETSDI

EETGNKVFLELLWRSFFQNAKQTRSRKEEYIYGYKDVTTCKIHDLMHDLAVSISGDECYTLQNLVEINKMPKNVH

HLVFPHPHKIGFVMQRCPIIRSLFSLHKNRMDSMKDVRFMVSPCRVLGLHICGNEIFSVEPAYMKHLRYLDLSSS

DIKTLPEAVSALYNLQILMLNRCRGLTHLPDGMKFMISLRHVYLDGCSSLQRMPPGLGQLSSLRTLTMYMVGNES

DRRLHELKDLELGGKLQIHNLLKVTNPLQAKEANLENKKNLQQLALCWDSRNFTCSHSHSADEYLQLCCPEEVLD

ALKPPNGLKVLKLRQYMGSDFPMWMEDGVTLQNIVKLSLRGSVMCVKLPPVWQLPFLEVLRLKRMERLKYLCYRY

PTDEEYGNQLVVFQKLKLLSLEWMESLENWHEYDTQQVTSVTFPKLDAMEIIDCPKLTALPNVPILKSLSLTGNK

VLLGLVSGISNLSYLYLGASQGSSRRVRTLYYIYNGEREGSTDTKDEHILPDHLLSWGSLTKLHLQGFNTPAPEN

VKSISGHMMSVQDLVLSSCDCFIQHEGLQSPLWFWISFGCLQQLEIWYCDSLTFWPEEEFRSLTSLEKLFIVDCK

NFTGVPPDRLSARPSTDGGPCNLEYLQIDRCPNLVVFPTNFICLRILVITHSNVLEGLPGGFGCQDTLTTLVILG

CPSFSSLPASIRCLSNLKSLELASNNSLTSLPEGMQNLTALKTLHFIKCPGITALPEGLQQRLHGLQTFTVEDCP

ALARRCRRGGDYWEKVKDIPDLRVTSRVPFQSEPIRKTFAPPRCRFFAWLVAKRRCWTADRLRSRGLPHPDRCVL

CDQHEETIDHILIACPESRQLWWVVLSSIGLPQCLPLNEDSFYLWLCNSRLKVGAASRRGFDTIATLTAWTIWKE

RNNRVFNSQQRPWSEIARAMAAEATLWRLAHAALPTLFNRMKCTTLFEGTWASSLSCLEILQHIQIWRPGVLKTY

HESFAGDLELVPCKPEVVRGLRYGSLLLAGHDRIATMIWLYQGQGFRNFLA

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	148	447	1.5e-81
NB-ARC [Pfam ls]	148	447	4.2e-82
LRR [Pfam ls]	591	613	0.22
LRR [Pfam ls]	614	634	4
LRR [Pfam ls]	638	661	0.31
LRR [Pfam ls]	1141	1164	0.059

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	591	613	0.0082
LRR [sensitive, ls]	591	613	0.22
LRR [sensitive, ls]	614	634	0.15
LRR [sensitive, ls]	614	634	4
LRR [sensitive, ls]	638	661	0.011
LRR [sensitive, ls]	638	661	0.31
LRR [sensitive, ls]	783	805	1.8
LRR [sensitive, ls]	783	805	48
LRR [sensitive, ls]	890	913	1.6
LRR [sensitive, ls]	890	913	44
LRR [sensitive, ls]	1015	1039	3.7
LRR [sensitive, ls]	1015	1039	100
LRR [sensitive, ls]	1040	1061	0.41
LRR [sensitive, ls]	1040	1061	11
LRR [sensitive, ls]	1072	1095	0.27
LRR [sensitive, ls]	1072	1095	7.3
LRR [sensitive, ls]	1117	1140	1.9
LRR [sensitive, ls]	1117	1140	52
LRR [sensitive, ls]	1141	1164	0.0022
LRR [sensitive, ls]	1141	1164	0.059
LRR [sensitive, ls]	1165	1185	4.1
LRR [sensitive, ls]	1165	1185	110

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	3	666	3e-48
RPM1 [A. thaliana]	20	852	3e-50
I2 [L. esculentum]	36	883	1e-116
Pib [Oryza sativa].	50	336	1e-10
Xa1 [Oryza sativa]	155	1199	2e-77
M [L. usitatissimum]	159	421	6e-13
Pib [Oryza sativa].	160	876	1e-40
RPS2 [A. thaliana]	162	669	3e-35
Pi-ta [Oryza sativa]	163	704	8e-23
N [N. glutinosa]	173	889	3e-12
RPP5 [A. thaliana]	173	1202	2e-14

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 6422.m00150

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)