Report for 6432.m00122

 > 6432.m00122, length: 570, copies: 1 

MGSFLRKQPSFLLILLILHLGAREARALSSDGEALLAFKKAVTTSDGIFLNWREQDVDPCNWKGVGCDSHTKRVV

CLILAYHKLVGPIPPEIGRLNQLQALSLQGNSLYGSLPPELGNCTKLQQLYLQGNYLSGHIPSEFGDLVELGTLD

LSSNTLSGSIPPSLDKLAKLTSFFIGNRGLCGKQINSVCKDALQSPSNGPLPPSADDFINRRNGKNSTRLVISAV

ATVGALLLVALMCFWGCFLYKNFGKKDIHGFRVELCGGSSIVMFHGDLPYSTKEILKKLETMDDENIIGVGGFGT

VYKLAMDDGNVFALKRIMKTNEGLGQFFDRELEILGSVKHRYLVNLRGYCNSPSSKLLIYDYLPGGNLDEVLHEK

SEQLDWDARINIILGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNFEARVSDFGLAKLLEDDKSHITTIVAGTF

GYLAPEYMQSGRATEKTDVYSFGVLLLEILSGKRPTDASFIEKGLNIVGWLNFLVGENREREIVDPYCEGVQIET

LDALLSLAKQCVSSLPEERPTMHRVVQMLESDVITPCPSDFYDSE

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	97	120	0.13
LRR [Pfam ls]	121	144	0.0094
LRR [Pfam ls]	145	168	0.19
Ser/Thr pkinase [Pfam fs]	287	554	1.4e-48
Ser/Thr pkinase [Pfam ls]	287	559	4.5e-48

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	97	120	0.004
LRR [sensitive, ls]	97	120	0.13
LRR [sensitive, ls]	121	144	0.0003
LRR [sensitive, ls]	121	144	0.0094
LRR [sensitive, ls]	145	168	0.0062
LRR [sensitive, ls]	145	168	0.19

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Xa21 [O. sativa]	10	182	9e-22
FLS2 [A.thaliana]	33	183	4e-19
Xa21 [O. sativa]	51	183	1e-13
Xa21 [O. sativa]	69	182	7e-15
Xa21 [O. sativa]	69	188	3e-12
FLS2 [A.thaliana]	71	183	1e-12
CLV2 [A. thaliana]	72	190	3e-12
CLV2 [A. thaliana]	74	183	6e-12
FLS2 [A.thaliana]	74	183	1e-11
FLS2 [A.thaliana]	77	182	1e-15
FLS2 [A.thaliana]	77	197	2e-14
FLS2 [A.thaliana]	77	288	3e-11
Xa21 [O. sativa]	77	376	3e-25
FLS2 [A.thaliana]	78	175	8e-12
FLS2 [A.thaliana]	84	554	5e-51
Rpg1 [Hordeum vulgare]	271	556	4e-33
Pto [L. esculentum]	275	555	2e-46
Rpg1 [Hordeum vulgare]	285	564	3e-23

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	221	243	in -> out

Report for 6432.m00122

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)