Report for 6441.m00138

> 6441.m00138, length: 1509, copies: 1
MKPHSSRSNKTSRFRINFFDPAFVLLLTFISPVNSCTEQERHSLLRFIAGLSQDSGLAASWQNSTDCCTWEGIIC
GEDGAVTEISLASRGLQGRISLSLRELTSLSRLNLSYNLLSGGLPSELISTSSIVVLDVSFNRLDGELQELNSSS
PERPLQVLNISSNLFTGAFPSTTWEKTSSLFAINASNNSFTGYIPSTFCISSSSFAVLDLSYNQFSGNIPHGIGK
CCSLRMLKVGHNNIIGTLPYDLFSAISLEYLSFANNGLQGTINGALIIKLRNLVFVDLGWNRFSGKIPDSIGQLK
KLEELHMCSNNLSGELPSSLGECTNLVTINLRSNKLEGELAKVNFSNLPNLKKIDFGSNNFTGTIPESIYSCSNL
TWLRLSSNRLHGQLTKNIGNLKFITFLSLSYNNFTNITNTLHILKSLRNLNVLLIGGNFKNEAMPQDEAINGFEN
ILCLAIEDCALSGKIPNWFSKLRNLQILVLHNNQLNGPIPTWTSSLKFLKYVDISNNNLTGEIPAGLMEMAMLKS
DKVADNSDPIAFPLPVYAGACLCFQYHTATALPKMLNLGNNKFTGAIPMEIGELKALVSLNLSFNNLNSEIPQSM
NNLKNLMVLDLSYNHLTGAIPPALMNLHFLSKFNVSYNDLEGPVPIGGQFSTFPSSSFAGNPKLCSPMLLHHCNS
AEEDLSSSNSTKDPSRFGRRRRFGTTTYGHSCVDGGGGGSAGRRAMARLVFNVAEAPVGFGVGVGVGGWMTGEPM
SLTNMSRTRVHFPSGPTIVGLMKEKAHNGTKNMGRIQVVIPFRPHDSSLTMSWRNNTDCCTWDGIICSMDGAVTE
LLLSSRGLEGQISPSLGELTSLSRLNLSYNSLSGGLPVELMSSSSIIVLDVCFNRLGGEVQELNSSVCDWPLQVL
NISSNRFTGDFPSTTWEKMRNLVVINASNNSFTGYIPSSFCISSPSFTVLDLSYNRFSGNIPPGIGNCSALKMFK
AGYNNISGTLPDELFDAISLEYLSFPNNGLQGRIDGTHLIKLKNLATLDLRWNQLTGKIPDSINQLKQLEELHLC
SNMMSGELPGKLSSCTNLKVIDLKHNNFYGDLGKVDFSALHNLRTLDLYLNNFTGTIPVSIYSCRNLKALRLSAN
HLHGELSSGIINLKYLSFLSLANNNFTNITNALQVLKSCRTMTTLLIGRNFRGEIMPQDENIDGFGNLQVLDISG
CLLSGNIPQWISRLKNLEMLILSANRLTGPIPGWINSLNLLFFIDMSDNRLTEEIPINLMNMTMLRSEKYVTHVD
PRVFEIPVYNGPSLQYRALTAFPTLLNLSYNSFTGEISPIIGQLEVHVLDFSFNNLSGKIPQSICNLTNLQVLHL
SNNHLTDAIPPGLSNLHFLSAFNVSNNDLEGPIPTGGQFDTFPDFSFRGNPKICSPIVARRCNSTEEALTSPIST
KQYIDKTVFVIAFGVSFGVGVTSLKLCSDLKYSHYSKAYSVAPQSPAPSKMNTPKENLIGQLVICQRDSVNAVYA
PKSRKLGRN

HMM searches against classifier domains (fs and ls)

DomainBeginEndE-value
LRR [Pfam ls]1041272.9
LRR [Pfam ls]2042278.8
LRR [Pfam ls]2522761.6
LRR [Pfam ls]2773003
LRR [Pfam ls]3013240.37
LRR [Pfam ls]3253490.12
LRR [Pfam ls]3503732.5
LRR [Pfam ls]3743971.1
LRR [Pfam ls]4744970.31
LRR [Pfam ls]4985210.48
LRR [Pfam ls]5816042.1
LRR [Pfam ls]6056280.012
LRR [Pfam ls]8468700.35
LRR [Pfam ls]8969202.3
LRR [Pfam ls]9219453.3
LRR [Pfam ls]9469690.07
LRR [Pfam ls]99410188
LRR [Pfam ls]101910420.15
LRR [Pfam ls]104310663.8
LRR [Pfam ls]106710912.2
LRR [Pfam ls]109211150.68
LRR [Pfam ls]111611396.4
LRR [Pfam ls]114011623.3
LRR [Pfam ls]119212150.02
LRR [Pfam ls]121612390.2
LRR [Pfam ls]132013430.19
LRR [Pfam fs]134413671.1e-05
LRR [Pfam ls]134413670.00016

Searches for specific additional domains (secondary HMMs)

DomainBeginEndE-value
LRR [sensitive, ls]1041270.14
LRR [sensitive, ls]1041272.9
LRR [sensitive, ls]1281500.9
LRR [sensitive, ls]12815019
LRR [sensitive, ls]1541780.97
LRR [sensitive, ls]15417820
LRR [sensitive, ls]1792022.7
LRR [sensitive, ls]17920256
LRR [sensitive, ls]2042270.42
LRR [sensitive, ls]2042278.8
LRR [sensitive, ls]2282491.4
LRR [sensitive, ls]22824929
LRR [sensitive, ls]2522760.079
LRR [sensitive, ls]2522761.6
LRR [sensitive, ls]2773000.15
LRR [sensitive, ls]2773003
LRR [sensitive, ls]3013240.018
LRR [sensitive, ls]3013240.37
LRR [sensitive, ls]3253490.006
LRR [sensitive, ls]3253490.12
LRR [sensitive, ls]3503730.12
LRR [sensitive, ls]3503732.5
LRR [sensitive, ls]3743970.051
LRR [sensitive, ls]3743971.1
LRR [sensitive, ls]3984200.49
LRR [sensitive, ls]39842010
LRR [sensitive, ls]4504731.2
LRR [sensitive, ls]45047324
LRR [sensitive, ls]4744970.015
LRR [sensitive, ls]4744970.31
LRR [sensitive, ls]4985210.023
LRR [sensitive, ls]4985210.48
LRR [sensitive, ls]5575802.3
LRR [sensitive, ls]55758049
LRR [sensitive, ls]5816040.1
LRR [sensitive, ls]5816042.1
LRR [sensitive, ls]6056280.00057
LRR [sensitive, ls]6056280.012
LRR [sensitive, ls]6296621.3
LRR [sensitive, ls]62966228
LRR [sensitive, ls]8228453
LRR [sensitive, ls]82284563
LRR [sensitive, ls]8468700.017
LRR [sensitive, ls]8468700.35
LRR [sensitive, ls]8969200.11
LRR [sensitive, ls]8969202.3
LRR [sensitive, ls]9219450.16
LRR [sensitive, ls]9219453.3
LRR [sensitive, ls]9469690.0034
LRR [sensitive, ls]9469690.07
LRR [sensitive, ls]99410180.38
LRR [sensitive, ls]99410188
LRR [sensitive, ls]101910420.0071
LRR [sensitive, ls]101910420.15
LRR [sensitive, ls]104310660.18
LRR [sensitive, ls]104310663.8
LRR [sensitive, ls]106710910.11
LRR [sensitive, ls]106710912.2
LRR [sensitive, ls]109211150.033
LRR [sensitive, ls]109211150.68
LRR [sensitive, ls]111611390.31
LRR [sensitive, ls]111611396.4
LRR [sensitive, ls]114011620.16
LRR [sensitive, ls]114011623.3
LRR [sensitive, ls]119212150.00094
LRR [sensitive, ls]119212150.02
LRR [sensitive, ls]121612390.0095
LRR [sensitive, ls]121612390.2
LRR [sensitive, ls]124012630.56
LRR [sensitive, ls]1240126312
LRR [sensitive, ls]129713193.3
LRR [sensitive, ls]1297131969
LRR [sensitive, ls]132013430.0091
LRR [sensitive, ls]132013430.19
LRR [sensitive, ls]134413677.9e-06
LRR [sensitive, ls]134413670.00016
LRR [sensitive, ls]136814012.2
LRR [sensitive, ls]1368140145

BLAST searches against classifier sequences

Query sequenceBeginEndE-value
CLV2 [A. thaliana]146811e-54
FLS2 [A.thaliana]246452e-70
Xa21 [O. sativa]373342e-23
Xa21 [O. sativa]436659e-60
Cf-9 [L. pimpinellifolium]606614e-42
FLS2 [A.thaliana]766871e-61
Cf-9 [L. pimpinellifolium]814069e-26
Cf-9 [L. pimpinellifolium]845165e-37
Cf-9 [L. pimpinellifolium]886785e-53
FLS2 [A.thaliana]23910282e-56
FLS2 [A.thaliana]32511504e-62
Xa21 [O. sativa]45410143e-32
Xa21 [O. sativa]58211311e-33
CLV2 [A. thaliana]79514533e-59
Cf-9 [L. pimpinellifolium]80013927e-44
FLS2 [A.thaliana]81013841e-70
Xa21 [O. sativa]81014074e-52
Cf-9 [L. pimpinellifolium]81812561e-33
Cf-9 [L. pimpinellifolium]82614818e-51
FLS2 [A.thaliana]83314044e-56
CLV2 [A. thaliana]88514067e-37

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

DomainBeginEndE-value

NCOILSv2.0 search for coiled-coil domains

DomainBeginEnd

TM-HMM search for transmembrane domains

DomainBeginEndOrientation