Report for 6449.m00239

 > 6449.m00239, length: 397, copies: 1 

MGNCGTREENAVVAAHAQVQQLHLLQHPVKNAVAERKHTRISSDMSDPSTPRKIEDAKNISIYNDVIDFTLFELE

TITRSFRADYVLGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKDGHQGHREWLTEVRFLGQLRHPNLVKLIGY

CCEDDHRLLVYEFMFRGSLENHLFRRTATPLSWATRMSIALGAAKGIYLLFALTQDYTAKLSDFGLAKAGPEGDQ

THVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSIDKSRPSREHSLVDWALPKLNDKRRLLQI

IDPKLEGQYSVRAAHKACSLAYYCLSQNPKARPLMSDVVETLEPLQGSGGSDGAVQSVLGSGLPSYRVNRRLMTN

RVHCRALPNPKCSPAVPACRVR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	81	191	2.4e-19
Ser/Thr pkinase [Pfam ls]	81	342	2.1e-30
Ser/Thr pkinase [Pfam fs]	203	342	9.4e-16

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Rpg1 [Hordeum vulgare]	68	342	9e-20
Rpg1 [Hordeum vulgare]	68	345	4e-16
Pto [L. esculentum]	69	343	5e-48
FLS2 [A.thaliana]	73	351	2e-25

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 6449.m00239

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)