Report for 6483.m00163

 > 6483.m00163, length: 413, copies: 1 

MRVGISEFPCRISGRPRQKWRRMERFVDDLLRSLKKNATLKIESIYRICNACVNPKRIPDLIEKVLATAIHEKLI

EITSSLEIKTNAAQLKIPHVGRSERREAVGWNLFRNYLTGPIPSFIGKFTSMQYLSLSFNPLSGLLPKELGNLTN

LLSLGISSDNFTGSLPEELGNLTKLQQLSASDNVFKGKIPAYLGTMTNLEDIWIGDIINGVSPLAFISNMASLST

LILRNCKISSDLGAVEFSMFKQLKLLFLGNNSLTGKLPDGISSSLKVIDFSYNQLTGSIPSWARQNNLQLNLVAN

NFLLDTTSESTLPWGINCLQQDTPCFRGSPEYYSFAVDCGSNASIRGSDDTIYEADPTNLGAATYYVTGQTRWGV

SSVGNAIDAKNIIYSSQPFQNVVDSELFETARMSSSSL

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	126	149	0.062
LRR [Pfam ls]	174	197	5.8
LRR [Pfam ls]	247	267	5.1
LRR [Pfam ls]	269	291	1.6

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	126	149	0.0023
LRR [sensitive, ls]	126	149	0.062
LRR [sensitive, ls]	150	173	0.32
LRR [sensitive, ls]	150	173	8.6
LRR [sensitive, ls]	174	197	0.21
LRR [sensitive, ls]	174	197	5.8
LRR [sensitive, ls]	222	246	0.56
LRR [sensitive, ls]	222	246	15
LRR [sensitive, ls]	247	267	0.19
LRR [sensitive, ls]	247	267	5.1
LRR [sensitive, ls]	269	291	0.057
LRR [sensitive, ls]	269	291	1.6

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	61	286	1e-22
FLS2 [A.thaliana]	75	291	9e-11
CLV2 [A. thaliana]	76	285	2e-13
Xa21 [O. sativa]	80	302	3e-16
CLV2 [A. thaliana]	81	275	5e-13
FLS2 [A.thaliana]	86	285	4e-17
CLV2 [A. thaliana]	97	314	1e-12
FLS2 [A.thaliana]	104	286	1e-10
Xa21 [O. sativa]	106	285	6e-14
Cf-9 [L. pimpinellifolium]	107	284	1e-12
CLV2 [A. thaliana]	107	328	1e-10
FLS2 [A.thaliana]	108	302	9e-21
FLS2 [A.thaliana]	108	302	8e-15
FLS2 [A.thaliana]	111	286	4e-19
FLS2 [A.thaliana]	111	307	7e-19
Xa21 [O. sativa]	111	294	6e-19
Xa21 [O. sativa]	115	303	7e-15
Cf-9 [L. pimpinellifolium]	117	301	2e-11
CLV2 [A. thaliana]	130	304	8e-12
FLS2 [A.thaliana]	130	303	9e-13

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 6483.m00163

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)