Report for 6494.m00170

 > 6494.m00170, length: 842, copies: 1 

MAARSCLHLLIVLAVAVAGGLLQAARGQPDSNGFISIDCGLSGKAGYVDNATKLSYSPDAAFTDAGTNNNISAEY

LSPANSRIFDNVRSFPAGAAPRSCYTLRSLVPGLKYLVRASFMYGNYDGLRRPPVFDLYAGVNFWRTVNITDAAA

SITAEAIIVVPEDSMQVCLLNTGAGTPFISSLDLRPLKNSLYPQANATQGLVMVSRVNFGPTDTFIRYPDDPRDR

GWRPWIDTMRYVEVSTTKTVQNVEKDLFEAPSAVMQTAITPRNASDSIELYWTADPSAAAGDPPPGYIAIMHFSE

LQLVQGNAVRAFNISLNDQWLDIGMTPDYLYADASFNTVPFRGSSRYNLTFRATANSTLPPIINALEIFSVIPTT

NVPTDGKDVSGITAIKKQYQVKQNWMGDPCVPKTLAWDWLTCSYAISSPPTITGVYDNNPDLCINDTCPSPNGKP

KLAIYISVPVVAVTVILVLVLFCLLRRKTKGSANNTINPHNEPTSHSHGSGSYGHGSMQFENRRFTYKDLQMITN

NFEQVLGKGGFGYVYYGILEEGTQVAVKLRSQSSNQGVKEFLTEAQILTRIHHKNLVSMIGYCKDGEYMALVYEY

MSEGTLEEHIAGRDHNKRNLTWTERLRIALESAQGLEYLHKGCSPPVVHRDVKATNILLNTNLEAKIADFGLSKA

FNRDSDTHVSTSILVGTPGYIDPEYVISKFFFICYIQSLTTKELVTGKSPILRTPEPISLIHWAQQRMQCGNIEG

VVDARMHGVYDVNSVWKVAEIGLMCTAQASAHRPMMTDVVAKLQECQDLEHGRAGSVAEPSIDHVSKTNTIFEID

RLERIPLPTMSSGPSAR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	525	699	2.1e-42
Ser/Thr pkinase [Pfam ls]	525	795	9.6e-29

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	452	809	7e-29
Pto [L. esculentum]	494	794	2e-50
Rpg1 [Hordeum vulgare]	510	824	8e-29
Rpg1 [Hordeum vulgare]	515	807	5e-23

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	7	25	in -> out
putative TM domain	453	475	out -> in

Report for 6494.m00170

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)