Report for 6498.m00140

 > 6498.m00140, length: 693, copies: 1 

MAQPLLLLLLAAAAAAAVAVVAVAQTNMADAEALMQLKKSFTNSSSLSSWLITNTDGDKSPCAPGSHEWHGVVCS

RGKVTGLRLNGLRLGGTVDVGALVGFHNLRSVSFAGNNFSGPLPAVDRLTSIKSMFFSDNQFTGVLPDDFFSKLS

HLKKLWLDHNELSGAIPASIAQATSLLELHLAHNAFSGELPPLPPPALKVFDISWNDLEGVVPEAFRKFDAGRFG

GNQYLCYVPTSDRPCKRVQAAAASSSKRSPMAFVTLLVSVVVVALVLCLCCNRSSRVHDFDPAHRGGDGLDERPP

VYMVKQFSTTGKRSASWLGKRTGSSLRGHRRAASAAKADELGGGAGDLVIVNNCKGVFGLTDLMKAAAEVIGSGG

HGSAYKAVMANGVAVVVKRARDMNRATKDAFEAEMKRLGAMSHANLLPPLAYHYRRDEKLLVYEYIPKGSLLYVL

HGDRGMDYAGLDWPTRLKVAVGVARGTAFLHGELAGHEVPHGNLKSANILLAPDFEPLLVDFGYSGLINHMQSPN

SMIARRAPECAAGHPVGAKADVYCLGIVLLELLTGKFPSLYLQNAKGGTDLVMWATSAIADGYERDLFDKAITSA

WKFALPDMARLMRVAVDCVETDADKRPDMKVAAARVEEVVAAAMATVRERHQAAGGESSRSSSHAQYVRDGSMQR

ITSVGERSSRRGSNDYSS

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	126	150	0.57
LRR [Pfam ls]	151	174	2
LRR [Pfam ls]	197	220	3.5
Ser/Thr pkinase [Pfam fs]	369	563	8.4e-22
Ser/Thr pkinase [Pfam ls]	369	640	2.5e-14

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	78	102	2.9
LRR [sensitive, ls]	78	102	68
LRR [sensitive, ls]	103	125	0.4
LRR [sensitive, ls]	103	125	9.4
LRR [sensitive, ls]	126	150	0.025
LRR [sensitive, ls]	126	150	0.57
LRR [sensitive, ls]	151	174	0.087
LRR [sensitive, ls]	151	174	2
LRR [sensitive, ls]	175	195	0.38
LRR [sensitive, ls]	175	195	8.8
LRR [sensitive, ls]	197	220	0.15
LRR [sensitive, ls]	197	220	3.5

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Xa21 [O. sativa]	30	216	4e-13
Xa21 [O. sativa]	82	218	2e-11
Cf-9 [L. pimpinellifolium]	101	215	2e-11
FLS2 [A.thaliana]	104	652	5e-29
Pto [L. esculentum]	358	629	2e-23
Rpg1 [Hordeum vulgare]	368	639	4e-13
Rpg1 [Hordeum vulgare]	370	629	4e-16

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	5	27	in -> out
putative TM domain	5	27	in -> out

Report for 6498.m00140

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)