Report for 6520.m00155

 > 6520.m00155, length: 247, copies: 1 

MINFGGVLCAVTLVVLLPFLEAADGKSTDPSEVSALMAIKGSLVDPMNNLKNWNRGDPCTKNWTGVFCHDLGDTY

LHVTELQLFRRNLSGNLVPEVSLLSQLKILDFMWNNLTGNIPKEIGNITTLKLILLNGNQLSGLLPDEIGNLQSL

TRLQVDQNHLSGAIPKSFANLRSVKHLHMNNNSLSGQIPSELSRLNTLLHLLVDNNNLSGPLPPELAAAKSLKIL

QADNNNFSGSSIPTLYYNSPDY

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	125	148	1
LRR [Pfam ls]	149	172	0.23
LRR [Pfam ls]	173	196	0.21

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	77	100	3.7
LRR [sensitive, ls]	77	100	100
LRR [sensitive, ls]	101	124	0.4
LRR [sensitive, ls]	101	124	11
LRR [sensitive, ls]	125	148	0.037
LRR [sensitive, ls]	125	148	1
LRR [sensitive, ls]	149	172	0.0083
LRR [sensitive, ls]	149	172	0.23
LRR [sensitive, ls]	173	196	0.0078
LRR [sensitive, ls]	173	196	0.21
LRR [sensitive, ls]	197	220	0.48
LRR [sensitive, ls]	197	220	13
LRR [sensitive, ls]	221	244	1.1
LRR [sensitive, ls]	221	244	29

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
CLV2 [A. thaliana]	13	245	2e-19
Xa21 [O. sativa]	14	245	2e-29
Xa21 [O. sativa]	14	241	1e-15
FLS2 [A.thaliana]	19	234	3e-23
Xa21 [O. sativa]	25	235	2e-14
FLS2 [A.thaliana]	33	234	9e-21
Cf-9 [L. pimpinellifolium]	41	234	3e-12
FLS2 [A.thaliana]	41	241	2e-21
FLS2 [A.thaliana]	41	238	5e-19
Cf-9 [L. pimpinellifolium]	52	244	1e-11
FLS2 [A.thaliana]	62	234	2e-25
FLS2 [A.thaliana]	64	243	5e-16
FLS2 [A.thaliana]	64	221	6e-15
Xa21 [O. sativa]	65	240	1e-20
Cf-9 [L. pimpinellifolium]	66	235	2e-14
CLV2 [A. thaliana]	67	234	1e-10
CLV2 [A. thaliana]	72	233	1e-18
FLS2 [A.thaliana]	76	235	1e-19
Cf-9 [L. pimpinellifolium]	77	234	2e-13
Xa21 [O. sativa]	77	235	6e-19
CLV2 [A. thaliana]	78	240	4e-19
FLS2 [A.thaliana]	78	234	4e-20
CLV2 [A. thaliana]	81	235	1e-19
CLV2 [A. thaliana]	81	235	7e-19
FLS2 [A.thaliana]	81	239	1e-22
FLS2 [A.thaliana]	81	235	4e-22
FLS2 [A.thaliana]	81	243	8e-14
FLS2 [A.thaliana]	88	234	2e-16

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 6520.m00155

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)