Report for 6525.m00283

 > 6525.m00283, length: 1389, copies: 2 

MATAGPARRSRRRCRRRPAPDPEWSRGRRSAAEQERLTAGMQPRVCRLWEEGSVGAGRSRRVAVEVIGAGQEAVD

LTVNPFLSLMFSLPALLIGACAFAAAAVAASGDGCRAGCSLAIAAYYFSEGSNLTFIATIFAIGGGGYQALLPYN

PAITNPDYVVTGDRVLVPFPCSCLGLPAAPASTFLAGAIPYPLPLPRGGGDTYDAVAANYADLTTAAWLEATNAY

PPGRIPGGDGRVNVTINCSCGDERVSPRYGLFLTYPLWDGETLESVAAQYGFSSPAEMELIRRYNPGMGGVSGKG

IVFIPVKDPNGSYHPLKSGVGIVLLFCELLCIYAKVAKVQEGHIASISRRNQPPCCYYLCDDASQAEGIKVERSI

EFSYEEIFNATQGFSMEHKIGQGGFGSVYYAELRGEKTAIKKMGMQATQEFLAELKVLTHVHHLNLVRLIGYCVE

NCLFLVYEFIDNGNLSQHLQRTGYAPLSWATRVQIALDSARGLEYLHEHVVPVYVHRDIKSANILLDKDFRAKIA

DFGLAKLTEVGSMSQSLSTRVAGTFGYMPPEARYGEVSPKVDVYAFGVVLYELLSAKQAIVRSSESVSESKGLVF

LFEEALSAPNPTEALDELIDPSLQGDYPVDSALKDSDLIYWNGSSQLIITGTIARDFVAENKRLKWIMVPAIKEE

VLPTMSASLIVRPHFAGNSTCHLGKLPAESSSNRASPCSYISDFKRNDVLDSLNGFDGNFRASHAAYGPAGFQGL

KPDTGDVGSRSGPKLGSNVQMPAMRIVGFESGFANSTGGPDTMVADNTDSPLVIDNCHSLIEQHGPHARKRVLSP

LNNALPGHFRGDALNIGSGDAKIQHSDCARRLYTSGFQDRKKANTAILDSFEAPTWPASRYSNWSTEQGVDKFSG

STFTDGPLLESRESFPCSDHLEALESVAVPLAKLAHPPLLNLSPLGPTWMHGTNTVGSHGESLRETEGSTCEGYS

EGHGRSRIRDAFEKTNILHDDFDMRIPKKSSDRKSQNWGPESASVSPRIGCIRSIGLLPVRRSLIGSFEESLLSG

RYSCGKDNQNIDGFLAVLNVTGGNFSPPTQKLPFSATSIDENSSLLYYSSIDLVGRLPMSSSKSPKLKRSLSNHD

SRSAKSRLRIPVKGRVQLVVSNPEKTPLHTFFCNYDLSDMPAGTKTYTLVVTANVSALSWSSYDGIFIIAYMDNA

ASHLIHAGHIDVLYTIHELLISGCKGCRPGQNCNLIDDSEKGGRKNMTCCSMECDIRESNDSSSLETSENGSSTN

VCCCQSDTFPLGEKKYCCRSSKINDPAGGALRYALHLRFLSPFAKKPSRSMQRSKSDVSSEPYNHSSGPEEHRRF

YLYNDVRVVFPQRHSDADEGELRVEHDFPADPKYFDISN

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	389	580	4e-54
Ser/Thr pkinase [Pfam ls]	389	658	7.4e-46

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	319	639	8e-25
Pto [L. esculentum]	374	623	4e-42
Rpg1 [Hordeum vulgare]	376	583	3e-25
Rpg1 [Hordeum vulgare]	376	587	1e-18

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	81	103	in -> out
putative TM domain	131	153	out -> in
putative TM domain	165	187	in -> out

Report for 6525.m00283

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)