Report for 6532.m00117

 > 6532.m00117, length: 911, copies: 1 

MNTLLPKLGELLVGEYKLQKGVKGEIEELEKELTSMTAALHKVAETPADKLDKLAKIWASDVRELSYDIEDAIDT

FMIKGKGHELATSFKKVTNLFNKFKTNHQIHGVIKDIMDQVKKVSERRSRYIVDDIAARPTIVDVDPRLEAMYRK

ATELVGINEPKSELTKRLLEHDYSSRQQSNIISIVGFGGLGKTTLANSLLQELEAKFDCHFFVSVSLKPDINKIL

KSILPQLDKKRYAHINEAWETKQFIDEIQDFLKNKRFLCVIDDVWEKSAWDDIKLAVQDAKLGSKIIVTTRNMVV

AEHAGGGVYEMKPLSNDDSRQLFCKRIFDSNDDCPGDLCGVTEKILKKCGGVPLAIITTACLLASKPRNSEEWDK

VNKSISLGLENNLDVDNMRKILSLSYNDLPFHLKTCLLSLSKYPEDELIRKDVLIWGWLAEGFITDETRLAGTSL

QEIGESYFSELINRSLIQPMDTYFQYEDGKVHECRVHDMVLELINQLSAEEDFVTTYLSDGQQAGKCTCTTQKKK

KIHRLSLHNSNKSYASPEAREQLSKVRSLTIFGKVDSIPPLSSFHVLRVLQIEDCSGMGKNHFSDLGKLRLLRFM

RLGCYSATELPESIGKLESLETLDIRGARSRTPYYSFKSPKVVFPMSFVKLRKLLRLFAGEVKLAQGLMLGNMKS

LQELEVEATPEVIKEIGYLKELRTLRIIVNSQISETLELVESIQTSIKRLTNLQDLDLRLSGVRETIDMQQIPSG

LQRLFMFRLDMEAFPCWINSSMLSRLTALSILLKSEYLQPDHLDRLAKLPSLRFLRLELEGDPFRLKQLTIHRGA

CAFRSLKYFHLYSYMMPSFQPGAMPHLERLCLLIMTFIVRGDLNDLGLENLHSLRHVTIHSCNDETKAVVKEALK

DCPNQAALELY

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	139	444	1.1e-66
NB-ARC [Pfam ls]	139	444	3.2e-67

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	1	904	1e-136
RPM1 [A. thaliana]	11	883	3e-63
Pi-ta [Oryza sativa]	18	624	9e-77
Pib [Oryza sativa].	53	323	5e-12
Pib [Oryza sativa].	59	660	4e-66
Xa1 [Oryza sativa]	103	733	8e-33
L6 [L. usitatissimum]	145	888	7e-11
I2 [L. esculentum]	152	808	4e-41
M [L. usitatissimum]	153	416	6e-14
RPS2 [A. thaliana]	174	728	4e-23

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	20	45

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 6532.m00117

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)