Report for 6532.m00120

 > 6532.m00120, length: 740, copies: 1 

MNIATGAMNTLLPKLGELLVGEYKLQKGVKGEIEELEKELKGMTAALHKVAETPVDQLDQQVKIWASEVRELSYD

IEDAIDTFMLKCKGHEPATSFKKVTNLFNKFKTNHQIHGVIKDIMDQVKKVSERRDRCRVDDIAARPTVVDVDSR

LEAMYRKATKLIGISKPKNELTKQLLEYDGSSSQQSNIISIVGFGGLGKTTLANSLFQELKAKFDSYCFVSVSLN

PDINKILKNILLQLDEKMYSHIDETWETKQLIDKIRDFLNNRRFLCVIDDVWKKSAWDTIKLAVQDAKLGSKIIV

TTRNKVIAEHAGGGVYEMKPLSDDDSRQLFCKRIFDSNDDCPADLCGVTEKILKKCGGVPLAIITTACLLASKPR

NSEEWDKVNKSISLGLENNLDVDNMRKILSLSYSDLPFHLKTCLLSLSKYTEDELIRKYVLIWSWLAEGFITDET

RPAGTSLQEIGESYFNELINRSLIQPMSENTLWDEDGKVHACKVHDMVLELINQLSVEEDFVTTYLSDGQQTGKH

TCTAQKKKIRRLSLHNSNKSYASPEAREQLSKVRSITIFGKVDSIPPLSSFHVLRVLQLEDCSGMDKNHLNHLDK

LLLLRFLRLGHYGATELPESIGKLESLETLDIRGARKPSSFKSHKVLFPMSFAKLRKLLRLYAGRVKLAQGLMLG

DMKSLQELVIEATRKVWRISTPFGMQPFIQAARLLLERHLRTILIKQRSKYDGDELTQSSVNYVT

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	146	451	3.7e-62
NB-ARC [Pfam ls]	146	451	1.8e-62

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	1	632	1e-131
RPM1 [A. thaliana]	3	665	6e-60
I2 [L. esculentum]	5	684	1e-41
Pi-ta [Oryza sativa]	25	631	2e-77
Pib [Oryza sativa].	62	330	4e-12
Pib [Oryza sativa].	109	665	3e-66
M [L. usitatissimum]	160	423	3e-15
Xa1 [Oryza sativa]	170	632	2e-26
RPS2 [A. thaliana]	171	670	2e-22

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	27	52

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 6532.m00120

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)