Report for 6532.m00121

 > 6532.m00121, length: 734, copies: 1 

MNIATGAMNTLLPKLGELLVGEYKLQKGVKGEIEELEKELKGMNAALHKVAETPVDQLDQQVKIWASEVRELSYD

IEDAIDTFMLKCKGHEPATSFKKVTNLFNKFKTNHQIHGVMKDIMDQVKKELKAKFDSYCFVSVSLNPDINKILK

NILLQLDEKMYSHIDETWETKQLIDKIRDFLNNRRFLCVIDDVWKKSAWDTIKLAVQDAKLGSKIIVTTRNKVVA

EHAGGGVYEMKPLSDDDSRQLFCKRIFDSNDDCPADLCGVTEKILKKCGGVPLAIITTACLLASKPRNSEEWDKV

NKSISLGLENNLDVDNMRKILSLSYNDLPFHLKTCLLSLSKYPEDELIRKDVLIWDWFAEGFITDETRPAGTSLQ

EIGESYFSELINRSLIQPMSVYYLLDDGKVHQCKVHDMVLELINQLSVEEDFVTTYLSDGQQTGKHTCTAQKKKI

RRLSLHNSNKSYASPEAREQLSKLEDCSGMDKNHLNHLDKLRLLRFLRLGHYSATKLPESIGKLESLETLDIRGA

RKPNSSKSHKSEAGTRSDAKGYEIFTGACNRSYLKEIIDMQQVPFGLQRLFMHHSYMKAFPCWINSSMLSRLTTL

SICLDFEYLQSDHLDRLAELPSLRFLRLQLAFVSEQLQEKLTIHRGACAFRSLKDFHFYSCMMPSFQPGAMPHLE

RLCLRIGTRLRRGDLNDLGLENLHSLRHVTIDYMGENTAVIEEALKDYPNQAALELLLR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	59	368	4.8e-38
NB-ARC [Pfam fs]	124	368	3.7e-51

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	1	125	2e-27
Mla1 [Hordeum vulgare].	123	522	1e-70
I2 [L. esculentum]	125	520	5e-30
RPM1 [A. thaliana]	125	526	6e-39
Pi-ta [Oryza sativa]	125	721	3e-63
Pib [Oryza sativa].	127	524	1e-46
Xa1 [Oryza sativa]	127	455	3e-17
RPS2 [A. thaliana]	154	526	4e-17

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	24	53

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 6532.m00121

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)